Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LSM6P62312 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LSM6P62312 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LSM6P62312 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.33■□□□□ 0.36
LSM6P62312 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.33■□□□□ 0.36
LSM6P62312 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM6P62312 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSM6P62312 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM6P62312 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM6P62312 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM6P62312 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.32■□□□□ 0.36
LSM6P62312 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM6P62312 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.32■□□□□ 0.36
LSM6P62312 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
LSM6P62312 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.32■□□□□ 0.36
LSM6P62312 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSM6P62312 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM6P62312 AC069152.1-201ENST00000438030 544 ntBASIC17.32■□□□□ 0.36
LSM6P62312 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.32■□□□□ 0.36
LSM6P62312 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.32■□□□□ 0.36
LSM6P62312 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.32■□□□□ 0.36
LSM6P62312 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LSM6P62312 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.32■□□□□ 0.36
LSM6P62312 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.32■□□□□ 0.36
LSM6P62312 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.32■□□□□ 0.36
LSM6P62312 AC104771.1-201ENST00000603335 964 ntBASIC17.32■□□□□ 0.36
LSM6P62312 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM6P62312 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.32■□□□□ 0.36
LSM6P62312 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM6P62312 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LSM6P62312 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM6P62312 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM6P62312 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.32■□□□□ 0.36
LSM6P62312 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.32■□□□□ 0.36
LSM6P62312 TFP1-202ENST00000475455 1573 ntBASIC17.32■□□□□ 0.36
LSM6P62312 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM6P62312 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LSM6P62312 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LSM6P62312 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM6P62312 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LSM6P62312 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM6P62312 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM6P62312 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM6P62312 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.31■□□□□ 0.36
LSM6P62312 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM6P62312 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM6P62312 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.31■□□□□ 0.36
LSM6P62312 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM6P62312 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSM6P62312 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.31■□□□□ 0.36
LSM6P62312 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.31■□□□□ 0.36
LSM6P62312 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.31■□□□□ 0.36
LSM6P62312 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.31■□□□□ 0.36
LSM6P62312 AC083880.1-201ENST00000608266 535 ntBASIC17.31■□□□□ 0.36
LSM6P62312 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
LSM6P62312 AC006557.6-201ENST00000623071 864 ntBASIC17.31■□□□□ 0.36
LSM6P62312 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LSM6P62312 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM6P62312 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.31■□□□□ 0.36
LSM6P62312 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM6P62312 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LSM6P62312 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LSM6P62312 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.31■□□□□ 0.36
LSM6P62312 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM6P62312 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSM6P62312 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.3■□□□□ 0.36
LSM6P62312 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LSM6P62312 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.3■□□□□ 0.36
LSM6P62312 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LSM6P62312 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM6P62312 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM6P62312 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.3■□□□□ 0.36
LSM6P62312 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LSM6P62312 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSM6P62312 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM6P62312 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.3■□□□□ 0.36
LSM6P62312 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSM6P62312 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.3■□□□□ 0.36
LSM6P62312 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.3■□□□□ 0.36
LSM6P62312 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.3■□□□□ 0.36
LSM6P62312 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM6P62312 PNMA6B-201ENST00000538162 1200 ntBASIC17.3■□□□□ 0.36
LSM6P62312 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.3■□□□□ 0.36
LSM6P62312 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.3■□□□□ 0.36
LSM6P62312 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM6P62312 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSM6P62312 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.3■□□□□ 0.36
LSM6P62312 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM6P62312 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM6P62312 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.3■□□□□ 0.36
LSM6P62312 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM6P62312 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM6P62312 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.29■□□□□ 0.36
LSM6P62312 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM6P62312 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.29■□□□□ 0.36
LSM6P62312 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LSM6P62312 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM6P62312 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LSM6P62312 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM6P62312 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms