Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ERVFC1P60507 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ERVFC1P60507 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.83■□□□□ 0.93
ERVFC1P60507 PHGDH-210ENST00000641115 1638 ntBASIC20.83■□□□□ 0.93
ERVFC1P60507 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.83■□□□□ 0.93
ERVFC1P60507 FAM8A6P-201ENST00000407496 1135 ntBASIC20.83■□□□□ 0.93
ERVFC1P60507 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.83■□□□□ 0.93
ERVFC1P60507 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.83■□□□□ 0.93
ERVFC1P60507 AC116562.4-202ENST00000641738 218 ntBASIC20.83■□□□□ 0.93
ERVFC1P60507 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ERVFC1P60507 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ERVFC1P60507 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ERVFC1P60507 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ERVFC1P60507 AC007225.1-201ENST00000566331 1836 ntBASIC20.83■□□□□ 0.92
ERVFC1P60507 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ERVFC1P60507 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
ERVFC1P60507 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.82■□□□□ 0.92
ERVFC1P60507 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERVFC1P60507 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.82■□□□□ 0.92
ERVFC1P60507 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERVFC1P60507 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.82■□□□□ 0.92
ERVFC1P60507 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERVFC1P60507 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERVFC1P60507 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ERVFC1P60507 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERVFC1P60507 AL031133.1-201ENST00000406807 723 ntBASIC20.82■□□□□ 0.92
ERVFC1P60507 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ERVFC1P60507 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERVFC1P60507 LINC01238-205ENST00000567549 1107 ntBASIC20.82■□□□□ 0.92
ERVFC1P60507 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ERVFC1P60507 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.82■□□□□ 0.92
ERVFC1P60507 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERVFC1P60507 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERVFC1P60507 AC096733.2-201ENST00000609937 1394 ntBASIC20.82■□□□□ 0.92
ERVFC1P60507 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERVFC1P60507 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.82■□□□□ 0.92
ERVFC1P60507 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ERVFC1P60507 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ERVFC1P60507 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.81■□□□□ 0.92
ERVFC1P60507 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.81■□□□□ 0.92
ERVFC1P60507 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ERVFC1P60507 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ERVFC1P60507 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ERVFC1P60507 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.81■□□□□ 0.92
ERVFC1P60507 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ERVFC1P60507 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ERVFC1P60507 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.81■□□□□ 0.92
ERVFC1P60507 RNF152P1-201ENST00000397754 604 ntBASIC20.81■□□□□ 0.92
ERVFC1P60507 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ERVFC1P60507 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
ERVFC1P60507 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.81■□□□□ 0.92
ERVFC1P60507 FAM207BP-201ENST00000447172 505 ntBASIC20.81■□□□□ 0.92
ERVFC1P60507 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.81■□□□□ 0.92
ERVFC1P60507 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.81■□□□□ 0.92
ERVFC1P60507 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.81■□□□□ 0.92
ERVFC1P60507 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.81■□□□□ 0.92
ERVFC1P60507 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.81■□□□□ 0.92
ERVFC1P60507 AC091076.1-201ENST00000610741 619 ntBASIC20.81■□□□□ 0.92
ERVFC1P60507 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.81■□□□□ 0.92
ERVFC1P60507 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.81■□□□□ 0.92
ERVFC1P60507 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ERVFC1P60507 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ERVFC1P60507 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.81■□□□□ 0.92
ERVFC1P60507 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ERVFC1P60507 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
ERVFC1P60507 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ERVFC1P60507 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ERVFC1P60507 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ERVFC1P60507 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ERVFC1P60507 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.8■□□□□ 0.92
ERVFC1P60507 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ERVFC1P60507 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ERVFC1P60507 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ERVFC1P60507 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ERVFC1P60507 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.8■□□□□ 0.92
ERVFC1P60507 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.8■□□□□ 0.92
ERVFC1P60507 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.8■□□□□ 0.92
ERVFC1P60507 YBX1P2-201ENST00000489612 999 ntBASIC20.8■□□□□ 0.92
ERVFC1P60507 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
ERVFC1P60507 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.8■□□□□ 0.92
ERVFC1P60507 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ERVFC1P60507 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ERVFC1P60507 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ERVFC1P60507 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ERVFC1P60507 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ERVFC1P60507 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERVFC1P60507 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ERVFC1P60507 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ERVFC1P60507 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERVFC1P60507 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERVFC1P60507 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERVFC1P60507 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERVFC1P60507 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERVFC1P60507 AC007663.1-201ENST00000438948 1240 ntBASIC20.79■□□□□ 0.92
ERVFC1P60507 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERVFC1P60507 CCR12P-201ENST00000446203 998 ntBASIC20.79■□□□□ 0.92
ERVFC1P60507 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ERVFC1P60507 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.79■□□□□ 0.92
ERVFC1P60507 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.79■□□□□ 0.92
ERVFC1P60507 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms