Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
KCNQ4P56696 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
KCNQ4P56696 ANKRD20A18P-201ENST00000359341 492 ntBASIC25.27■■□□□ 1.64
KCNQ4P56696 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
KCNQ4P56696 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC25.27■■□□□ 1.64
KCNQ4P56696 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
KCNQ4P56696 AC116407.4-201ENST00000623319 1061 ntBASIC25.27■■□□□ 1.64
KCNQ4P56696 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC25.27■■□□□ 1.64
KCNQ4P56696 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
KCNQ4P56696 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
KCNQ4P56696 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
KCNQ4P56696 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
KCNQ4P56696 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
KCNQ4P56696 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
KCNQ4P56696 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC25.27■■□□□ 1.64
KCNQ4P56696 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
KCNQ4P56696 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
KCNQ4P56696 PLK5-205ENST00000642079 1969 ntBASIC25.26■■□□□ 1.63
KCNQ4P56696 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
KCNQ4P56696 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
KCNQ4P56696 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
KCNQ4P56696 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC25.26■■□□□ 1.63
KCNQ4P56696 PTK2-216ENST00000519881 863 ntTSL 3 BASIC25.26■■□□□ 1.63
KCNQ4P56696 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC25.26■■□□□ 1.63
KCNQ4P56696 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC25.26■■□□□ 1.63
KCNQ4P56696 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC25.26■■□□□ 1.63
KCNQ4P56696 AL023803.3-201ENST00000615559 522 ntBASIC25.26■■□□□ 1.63
KCNQ4P56696 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.26■■□□□ 1.63
KCNQ4P56696 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
KCNQ4P56696 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
KCNQ4P56696 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
KCNQ4P56696 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
KCNQ4P56696 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
KCNQ4P56696 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
KCNQ4P56696 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
KCNQ4P56696 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
KCNQ4P56696 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
KCNQ4P56696 SLC25A1P2-201ENST00000430693 912 ntBASIC25.25■■□□□ 1.63
KCNQ4P56696 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC25.25■■□□□ 1.63
KCNQ4P56696 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC25.25■■□□□ 1.63
KCNQ4P56696 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
KCNQ4P56696 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
KCNQ4P56696 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
KCNQ4P56696 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC25.25■■□□□ 1.63
KCNQ4P56696 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
KCNQ4P56696 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
KCNQ4P56696 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
KCNQ4P56696 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.24■■□□□ 1.63
KCNQ4P56696 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.24■■□□□ 1.63
KCNQ4P56696 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
KCNQ4P56696 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
KCNQ4P56696 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
KCNQ4P56696 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
KCNQ4P56696 DPP3P2-201ENST00000416030 1696 ntBASIC25.24■■□□□ 1.63
KCNQ4P56696 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
KCNQ4P56696 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
KCNQ4P56696 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
KCNQ4P56696 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC25.24■■□□□ 1.63
KCNQ4P56696 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC25.24■■□□□ 1.63
KCNQ4P56696 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC25.24■■□□□ 1.63
KCNQ4P56696 AC010653.2-201ENST00000623505 997 ntBASIC25.24■■□□□ 1.63
KCNQ4P56696 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.24■■□□□ 1.63
KCNQ4P56696 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
KCNQ4P56696 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
KCNQ4P56696 FBXW4P1-201ENST00000426721 2239 ntBASIC25.24■■□□□ 1.63
KCNQ4P56696 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.24■■□□□ 1.63
KCNQ4P56696 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.24■■□□□ 1.63
KCNQ4P56696 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
KCNQ4P56696 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
KCNQ4P56696 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
KCNQ4P56696 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
KCNQ4P56696 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC25.23■■□□□ 1.63
KCNQ4P56696 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
KCNQ4P56696 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
KCNQ4P56696 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
KCNQ4P56696 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
KCNQ4P56696 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC25.23■■□□□ 1.63
KCNQ4P56696 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC25.23■■□□□ 1.63
KCNQ4P56696 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
KCNQ4P56696 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC25.23■■□□□ 1.63
KCNQ4P56696 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC25.23■■□□□ 1.63
KCNQ4P56696 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.23■■□□□ 1.63
KCNQ4P56696 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
KCNQ4P56696 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
KCNQ4P56696 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.22■■□□□ 1.63
KCNQ4P56696 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
KCNQ4P56696 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
KCNQ4P56696 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
KCNQ4P56696 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
KCNQ4P56696 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
KCNQ4P56696 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC25.22■■□□□ 1.63
KCNQ4P56696 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC25.22■■□□□ 1.63
KCNQ4P56696 ETFA-216ENST00000560726 942 ntTSL 3 BASIC25.22■■□□□ 1.63
KCNQ4P56696 IRF5-214ENST00000613821 595 ntTSL 5 BASIC25.22■■□□□ 1.63
KCNQ4P56696 ECEL1P1-201ENST00000373592 1742 ntBASIC25.22■■□□□ 1.63
KCNQ4P56696 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
KCNQ4P56696 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
KCNQ4P56696 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
KCNQ4P56696 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KCNQ4P56696 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms