Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S2P56377 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S2P56377 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S2P56377 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.21■□□□□ 0.67
AP1S2P56377 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S2P56377 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S2P56377 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
AP1S2P56377 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.2■□□□□ 0.66
AP1S2P56377 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.2■□□□□ 0.66
AP1S2P56377 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S2P56377 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S2P56377 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S2P56377 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.2■□□□□ 0.66
AP1S2P56377 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S2P56377 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S2P56377 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
AP1S2P56377 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S2P56377 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.2■□□□□ 0.66
AP1S2P56377 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.2■□□□□ 0.66
AP1S2P56377 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.2■□□□□ 0.66
AP1S2P56377 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.2■□□□□ 0.66
AP1S2P56377 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S2P56377 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.2■□□□□ 0.66
AP1S2P56377 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
AP1S2P56377 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S2P56377 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.2■□□□□ 0.66
AP1S2P56377 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.2■□□□□ 0.66
AP1S2P56377 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S2P56377 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.2■□□□□ 0.66
AP1S2P56377 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.2■□□□□ 0.66
AP1S2P56377 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.2■□□□□ 0.66
AP1S2P56377 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
AP1S2P56377 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.19■□□□□ 0.66
AP1S2P56377 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
AP1S2P56377 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
AP1S2P56377 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.19■□□□□ 0.66
AP1S2P56377 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S2P56377 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.19■□□□□ 0.66
AP1S2P56377 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S2P56377 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.19■□□□□ 0.66
AP1S2P56377 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S2P56377 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.19■□□□□ 0.66
AP1S2P56377 SOX15-203ENST00000570788 1093 ntBASIC19.19■□□□□ 0.66
AP1S2P56377 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
AP1S2P56377 AC120498.8-201ENST00000614275 531 ntBASIC19.19■□□□□ 0.66
AP1S2P56377 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S2P56377 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
AP1S2P56377 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S2P56377 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S2P56377 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
AP1S2P56377 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S2P56377 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
AP1S2P56377 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.19■□□□□ 0.66
AP1S2P56377 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S2P56377 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.18■□□□□ 0.66
AP1S2P56377 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
AP1S2P56377 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
AP1S2P56377 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.18■□□□□ 0.66
AP1S2P56377 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.18■□□□□ 0.66
AP1S2P56377 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
AP1S2P56377 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
AP1S2P56377 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.18■□□□□ 0.66
AP1S2P56377 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S2P56377 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP1S2P56377 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP1S2P56377 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP1S2P56377 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.17■□□□□ 0.66
AP1S2P56377 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
AP1S2P56377 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.17■□□□□ 0.66
AP1S2P56377 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP1S2P56377 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP1S2P56377 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.17■□□□□ 0.66
AP1S2P56377 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.17■□□□□ 0.66
AP1S2P56377 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.17■□□□□ 0.66
AP1S2P56377 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.17■□□□□ 0.66
AP1S2P56377 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
AP1S2P56377 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.17■□□□□ 0.66
AP1S2P56377 AC008687.6-201ENST00000596318 630 ntBASIC19.17■□□□□ 0.66
AP1S2P56377 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.17■□□□□ 0.66
AP1S2P56377 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.17■□□□□ 0.66
AP1S2P56377 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP1S2P56377 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP1S2P56377 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms