Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.08■□□□□ 0.96
CDH8P55286 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH8P55286 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.08■□□□□ 0.96
CDH8P55286 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH8P55286 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH8P55286 AFG3L1P-217ENST00000557444 2447 ntBASIC21.07■□□□□ 0.96
CDH8P55286 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH8P55286 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.07■□□□□ 0.96
CDH8P55286 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.07■□□□□ 0.96
CDH8P55286 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CDH8P55286 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.07■□□□□ 0.96
CDH8P55286 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CDH8P55286 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.07■□□□□ 0.96
CDH8P55286 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDH8P55286 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH8P55286 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.07■□□□□ 0.96
CDH8P55286 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.07■□□□□ 0.96
CDH8P55286 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.07■□□□□ 0.96
CDH8P55286 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.07■□□□□ 0.96
CDH8P55286 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.07■□□□□ 0.96
CDH8P55286 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.07■□□□□ 0.96
CDH8P55286 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.07■□□□□ 0.96
CDH8P55286 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.07■□□□□ 0.96
CDH8P55286 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDH8P55286 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH8P55286 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDH8P55286 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CDH8P55286 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH8P55286 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.07■□□□□ 0.96
CDH8P55286 NBPF21P-201ENST00000425093 1451 ntBASIC21.07■□□□□ 0.96
CDH8P55286 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.07■□□□□ 0.96
CDH8P55286 AC009237.14-201ENST00000609975 1594 ntBASIC21.06■□□□□ 0.96
CDH8P55286 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH8P55286 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH8P55286 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH8P55286 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDH8P55286 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CDH8P55286 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CDH8P55286 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.06■□□□□ 0.96
CDH8P55286 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CDH8P55286 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.06■□□□□ 0.96
CDH8P55286 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH8P55286 FAM197Y4-202ENST00000622692 608 ntBASIC21.06■□□□□ 0.96
CDH8P55286 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.06■□□□□ 0.96
CDH8P55286 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH8P55286 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH8P55286 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CDH8P55286 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH8P55286 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH8P55286 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH8P55286 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CDH8P55286 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH8P55286 AP006587.1-201ENST00000534129 1502 ntBASIC21.05■□□□□ 0.96
CDH8P55286 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH8P55286 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH8P55286 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH8P55286 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH8P55286 AC133681.1-201ENST00000465482 601 ntBASIC21.05■□□□□ 0.96
CDH8P55286 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH8P55286 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH8P55286 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.05■□□□□ 0.96
CDH8P55286 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH8P55286 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH8P55286 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CDH8P55286 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH8P55286 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH8P55286 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH8P55286 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH8P55286 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH8P55286 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CDH8P55286 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH8P55286 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH8P55286 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDH8P55286 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDH8P55286 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH8P55286 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CDH8P55286 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CDH8P55286 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH8P55286 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH8P55286 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH8P55286 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH8P55286 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH8P55286 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CDH8P55286 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH8P55286 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.04■□□□□ 0.96
CDH8P55286 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH8P55286 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH8P55286 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH8P55286 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH8P55286 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH8P55286 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH8P55286 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDH8P55286 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDH8P55286 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH8P55286 TMEM179-206ENST00000616017 1645 ntBASIC21.04■□□□□ 0.96
CDH8P55286 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.04■□□□□ 0.96
CDH8P55286 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH8P55286 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CDH8P55286 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH8P55286 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms