Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC24.12■■□□□ 1.45
PDE1AP54750 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
PDE1AP54750 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PDE1AP54750 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE1AP54750 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE1AP54750 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDE1AP54750 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
PDE1AP54750 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDE1AP54750 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.11■■□□□ 1.45
PDE1AP54750 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.11■■□□□ 1.45
PDE1AP54750 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
PDE1AP54750 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.11■■□□□ 1.45
PDE1AP54750 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.11■■□□□ 1.45
PDE1AP54750 AC008687.6-201ENST00000596318 630 ntBASIC24.11■■□□□ 1.45
PDE1AP54750 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.11■■□□□ 1.45
PDE1AP54750 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.11■■□□□ 1.45
PDE1AP54750 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDE1AP54750 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC24.11■■□□□ 1.45
PDE1AP54750 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDE1AP54750 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PDE1AP54750 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC24.1■■□□□ 1.45
PDE1AP54750 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDE1AP54750 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDE1AP54750 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.1■■□□□ 1.45
PDE1AP54750 AC008403.3-201ENST00000598924 454 ntBASIC24.1■■□□□ 1.45
PDE1AP54750 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.1■■□□□ 1.45
PDE1AP54750 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.1■■□□□ 1.45
PDE1AP54750 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PDE1AP54750 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDE1AP54750 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDE1AP54750 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.1■■□□□ 1.45
PDE1AP54750 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDE1AP54750 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC24.1■■□□□ 1.45
PDE1AP54750 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDE1AP54750 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDE1AP54750 AC093484.2-201ENST00000580996 2166 ntBASIC24.09■■□□□ 1.45
PDE1AP54750 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
PDE1AP54750 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PDE1AP54750 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
PDE1AP54750 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PDE1AP54750 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PDE1AP54750 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PDE1AP54750 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC24.09■■□□□ 1.45
PDE1AP54750 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.09■■□□□ 1.45
PDE1AP54750 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC24.09■■□□□ 1.45
PDE1AP54750 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC24.09■■□□□ 1.45
PDE1AP54750 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PDE1AP54750 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
PDE1AP54750 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PDE1AP54750 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
PDE1AP54750 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.09■■□□□ 1.45
PDE1AP54750 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PDE1AP54750 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PDE1AP54750 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PDE1AP54750 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC24.08■■□□□ 1.45
PDE1AP54750 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.08■■□□□ 1.45
PDE1AP54750 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.08■■□□□ 1.45
PDE1AP54750 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.45
PDE1AP54750 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PDE1AP54750 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PDE1AP54750 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
PDE1AP54750 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.08■■□□□ 1.44
PDE1AP54750 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC24.08■■□□□ 1.44
PDE1AP54750 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
PDE1AP54750 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PDE1AP54750 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.07■■□□□ 1.44
PDE1AP54750 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC24.07■■□□□ 1.44
PDE1AP54750 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PDE1AP54750 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PDE1AP54750 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.07■■□□□ 1.44
PDE1AP54750 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
PDE1AP54750 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PDE1AP54750 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PDE1AP54750 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PDE1AP54750 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC24.07■■□□□ 1.44
PDE1AP54750 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PDE1AP54750 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
PDE1AP54750 AC007952.6-201ENST00000573168 2673 ntBASIC24.07■■□□□ 1.44
PDE1AP54750 AC003957.1-201ENST00000625108 2673 ntBASIC24.07■■□□□ 1.44
PDE1AP54750 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
PDE1AP54750 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDE1AP54750 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC24.06■■□□□ 1.44
PDE1AP54750 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDE1AP54750 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDE1AP54750 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.06■■□□□ 1.44
PDE1AP54750 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.06■■□□□ 1.44
PDE1AP54750 RNA5SP413-201ENST00000516373 109 ntBASIC24.06■■□□□ 1.44
PDE1AP54750 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PDE1AP54750 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.06■■□□□ 1.44
PDE1AP54750 AL121906.2-201ENST00000621597 723 ntBASIC24.06■■□□□ 1.44
PDE1AP54750 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC24.06■■□□□ 1.44
PDE1AP54750 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDE1AP54750 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PDE1AP54750 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDE1AP54750 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.06■■□□□ 1.44
PDE1AP54750 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDE1AP54750 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
PDE1AP54750 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PDE1AP54750 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDE1AP54750 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms