Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGA2P52926 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGA2P52926 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGA2P52926 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
HMGA2P52926 CNN2P6-201ENST00000439038 900 ntBASIC17.99■□□□□ 0.47
HMGA2P52926 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGA2P52926 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGA2P52926 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HMGA2P52926 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGA2P52926 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.99■□□□□ 0.47
HMGA2P52926 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.99■□□□□ 0.47
HMGA2P52926 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HMGA2P52926 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HMGA2P52926 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HMGA2P52926 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 ZNRF2P3-201ENST00000424200 374 ntBASIC17.98■□□□□ 0.47
HMGA2P52926 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.98■□□□□ 0.47
HMGA2P52926 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.98■□□□□ 0.47
HMGA2P52926 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.98■□□□□ 0.47
HMGA2P52926 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.98■□□□□ 0.47
HMGA2P52926 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.98■□□□□ 0.47
HMGA2P52926 NEFHP1-201ENST00000412845 2629 ntBASIC17.98■□□□□ 0.47
HMGA2P52926 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.98■□□□□ 0.47
HMGA2P52926 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HMGA2P52926 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGA2P52926 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGA2P52926 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HMGA2P52926 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.97■□□□□ 0.47
HMGA2P52926 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGA2P52926 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGA2P52926 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.97■□□□□ 0.47
HMGA2P52926 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGA2P52926 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGA2P52926 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGA2P52926 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGA2P52926 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HMGA2P52926 DUX4L16-201ENST00000555130 1264 ntBASIC17.97■□□□□ 0.47
HMGA2P52926 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.97■□□□□ 0.47
HMGA2P52926 C2orf69P4-201ENST00000565394 541 ntBASIC17.97■□□□□ 0.47
HMGA2P52926 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGA2P52926 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.97■□□□□ 0.47
HMGA2P52926 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGA2P52926 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGA2P52926 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HMGA2P52926 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGA2P52926 AL161938.1-201ENST00000569833 2180 ntBASIC17.97■□□□□ 0.47
HMGA2P52926 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.97■□□□□ 0.47
HMGA2P52926 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGA2P52926 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGA2P52926 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
HMGA2P52926 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGA2P52926 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGA2P52926 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HMGA2P52926 AC141586.3-201ENST00000562166 1838 ntBASIC17.96■□□□□ 0.47
HMGA2P52926 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGA2P52926 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGA2P52926 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HMGA2P52926 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGA2P52926 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.96■□□□□ 0.47
HMGA2P52926 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HMGA2P52926 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms