Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCNKAP51800 AC099778.1-201ENST00000568593 1911 ntBASIC19.35■□□□□ 0.69
CLCNKAP51800 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.34■□□□□ 0.69
CLCNKAP51800 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCNKAP51800 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLCNKAP51800 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.34■□□□□ 0.69
CLCNKAP51800 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCNKAP51800 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCNKAP51800 LINC01521-201ENST00000504184 1943 ntBASIC19.34■□□□□ 0.69
CLCNKAP51800 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CLCNKAP51800 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCNKAP51800 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCNKAP51800 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCNKAP51800 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCNKAP51800 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.34■□□□□ 0.69
CLCNKAP51800 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCNKAP51800 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.34■□□□□ 0.69
CLCNKAP51800 AP001412.1-201ENST00000608405 714 ntBASIC19.34■□□□□ 0.69
CLCNKAP51800 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.34■□□□□ 0.69
CLCNKAP51800 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCNKAP51800 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.34■□□□□ 0.69
CLCNKAP51800 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCNKAP51800 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCNKAP51800 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCNKAP51800 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCNKAP51800 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCNKAP51800 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCNKAP51800 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLCNKAP51800 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.33■□□□□ 0.69
CLCNKAP51800 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLCNKAP51800 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.33■□□□□ 0.69
CLCNKAP51800 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.33■□□□□ 0.69
CLCNKAP51800 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.33■□□□□ 0.69
CLCNKAP51800 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLCNKAP51800 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLCNKAP51800 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLCNKAP51800 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCNKAP51800 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CLCNKAP51800 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CLCNKAP51800 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.33■□□□□ 0.68
CLCNKAP51800 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.33■□□□□ 0.68
CLCNKAP51800 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCNKAP51800 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.33■□□□□ 0.68
CLCNKAP51800 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCNKAP51800 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.33■□□□□ 0.68
CLCNKAP51800 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.33■□□□□ 0.68
CLCNKAP51800 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.33■□□□□ 0.68
CLCNKAP51800 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCNKAP51800 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCNKAP51800 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.33■□□□□ 0.68
CLCNKAP51800 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.33■□□□□ 0.68
CLCNKAP51800 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.33■□□□□ 0.68
CLCNKAP51800 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCNKAP51800 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.33■□□□□ 0.68
CLCNKAP51800 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCNKAP51800 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCNKAP51800 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CLCNKAP51800 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.33■□□□□ 0.68
CLCNKAP51800 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CLCNKAP51800 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.33■□□□□ 0.68
CLCNKAP51800 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CLCNKAP51800 AL691432.2-201ENST00000607222 2038 ntBASIC19.32■□□□□ 0.68
CLCNKAP51800 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCNKAP51800 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCNKAP51800 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CLCNKAP51800 AP006587.1-201ENST00000534129 1502 ntBASIC19.32■□□□□ 0.68
CLCNKAP51800 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCNKAP51800 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCNKAP51800 AL353807.1-201ENST00000427475 662 ntBASIC19.32■□□□□ 0.68
CLCNKAP51800 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.32■□□□□ 0.68
CLCNKAP51800 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLCNKAP51800 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCNKAP51800 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.32■□□□□ 0.68
CLCNKAP51800 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCNKAP51800 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCNKAP51800 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCNKAP51800 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCNKAP51800 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCNKAP51800 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CLCNKAP51800 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCNKAP51800 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCNKAP51800 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCNKAP51800 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCNKAP51800 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.31■□□□□ 0.68
CLCNKAP51800 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCNKAP51800 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCNKAP51800 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLCNKAP51800 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCNKAP51800 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCNKAP51800 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCNKAP51800 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CLCNKAP51800 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCNKAP51800 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CLCNKAP51800 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCNKAP51800 AL596275.1-201ENST00000423464 877 ntBASIC19.31■□□□□ 0.68
CLCNKAP51800 YBX1P10-201ENST00000444752 975 ntBASIC19.31■□□□□ 0.68
CLCNKAP51800 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCNKAP51800 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.31■□□□□ 0.68
CLCNKAP51800 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms