Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GPC3P51654 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
GPC3P51654 AC116351.2-201ENST00000606540 1585 ntBASIC21.82■■□□□ 1.08
GPC3P51654 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
GPC3P51654 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
GPC3P51654 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
GPC3P51654 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GPC3P51654 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
GPC3P51654 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
GPC3P51654 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GPC3P51654 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.81■■□□□ 1.08
GPC3P51654 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.81■■□□□ 1.08
GPC3P51654 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.81■■□□□ 1.08
GPC3P51654 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
GPC3P51654 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
GPC3P51654 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GPC3P51654 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
GPC3P51654 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
GPC3P51654 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
GPC3P51654 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPC3P51654 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPC3P51654 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPC3P51654 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.8■■□□□ 1.08
GPC3P51654 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GPC3P51654 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GPC3P51654 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPC3P51654 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.8■■□□□ 1.08
GPC3P51654 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.8■■□□□ 1.08
GPC3P51654 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GPC3P51654 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
GPC3P51654 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.8■■□□□ 1.08
GPC3P51654 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GPC3P51654 TSPY15P-201ENST00000457163 923 ntBASIC21.8■■□□□ 1.08
GPC3P51654 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.8■■□□□ 1.08
GPC3P51654 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.8■■□□□ 1.08
GPC3P51654 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
GPC3P51654 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GPC3P51654 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
GPC3P51654 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GPC3P51654 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
GPC3P51654 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
GPC3P51654 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
GPC3P51654 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.79■■□□□ 1.08
GPC3P51654 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.79■■□□□ 1.08
GPC3P51654 BX088651.1-201ENST00000540551 451 ntBASIC21.79■■□□□ 1.08
GPC3P51654 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.79■■□□□ 1.08
GPC3P51654 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GPC3P51654 CD177P1-201ENST00000606252 935 ntBASIC21.79■■□□□ 1.08
GPC3P51654 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.79■■□□□ 1.08
GPC3P51654 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
GPC3P51654 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
GPC3P51654 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GPC3P51654 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
GPC3P51654 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GPC3P51654 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GPC3P51654 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPC3P51654 TFP1-202ENST00000475455 1573 ntBASIC21.78■■□□□ 1.08
GPC3P51654 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.78■■□□□ 1.08
GPC3P51654 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
GPC3P51654 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPC3P51654 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
GPC3P51654 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPC3P51654 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
GPC3P51654 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
GPC3P51654 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.78■■□□□ 1.08
GPC3P51654 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
GPC3P51654 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GPC3P51654 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.78■■□□□ 1.08
GPC3P51654 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.78■■□□□ 1.08
GPC3P51654 AC026471.5-201ENST00000615068 467 ntBASIC21.78■■□□□ 1.08
GPC3P51654 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
GPC3P51654 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPC3P51654 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.78■■□□□ 1.08
GPC3P51654 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPC3P51654 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPC3P51654 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPC3P51654 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.78■■□□□ 1.08
GPC3P51654 AC018553.1-201ENST00000616682 1458 ntBASIC21.77■■□□□ 1.08
GPC3P51654 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPC3P51654 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.77■■□□□ 1.08
GPC3P51654 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GPC3P51654 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
GPC3P51654 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPC3P51654 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPC3P51654 AP006587.1-201ENST00000534129 1502 ntBASIC21.77■■□□□ 1.08
GPC3P51654 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPC3P51654 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.77■■□□□ 1.08
GPC3P51654 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPC3P51654 FAM197Y1-201ENST00000421178 764 ntBASIC21.77■■□□□ 1.08
GPC3P51654 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPC3P51654 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.77■■□□□ 1.08
GPC3P51654 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPC3P51654 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
GPC3P51654 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.77■■□□□ 1.08
GPC3P51654 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.77■■□□□ 1.08
GPC3P51654 AL355075.4-201ENST00000554988 638 ntBASIC21.77■■□□□ 1.08
GPC3P51654 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPC3P51654 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.77■■□□□ 1.08
GPC3P51654 AC073195.1-201ENST00000607241 877 ntBASIC21.77■■□□□ 1.08
GPC3P51654 AL353708.3-201ENST00000610272 989 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms