Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC026310.3-201ENST00000625186 2373 ntBASIC21.92■■□□□ 1.1
CPT1AP50416 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.92■■□□□ 1.1
CPT1AP50416 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPT1AP50416 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPT1AP50416 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPT1AP50416 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPT1AP50416 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPT1AP50416 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPT1AP50416 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPT1AP50416 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPT1AP50416 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.91■■□□□ 1.1
CPT1AP50416 AC004951.3-201ENST00000418645 1148 ntBASIC21.91■■□□□ 1.1
CPT1AP50416 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CPT1AP50416 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
CPT1AP50416 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.91■■□□□ 1.1
CPT1AP50416 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.91■■□□□ 1.1
CPT1AP50416 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CPT1AP50416 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.91■■□□□ 1.1
CPT1AP50416 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.91■■□□□ 1.1
CPT1AP50416 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPT1AP50416 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.91■■□□□ 1.1
CPT1AP50416 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPT1AP50416 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.91■■□□□ 1.1
CPT1AP50416 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPT1AP50416 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPT1AP50416 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.91■■□□□ 1.1
CPT1AP50416 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CPT1AP50416 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPT1AP50416 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPT1AP50416 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPT1AP50416 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CPT1AP50416 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CPT1AP50416 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPT1AP50416 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.9■■□□□ 1.1
CPT1AP50416 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CPT1AP50416 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPT1AP50416 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.9■■□□□ 1.1
CPT1AP50416 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.9■■□□□ 1.1
CPT1AP50416 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.9■■□□□ 1.1
CPT1AP50416 NTF6B-201ENST00000591913 560 ntBASIC21.9■■□□□ 1.1
CPT1AP50416 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CPT1AP50416 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPT1AP50416 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.9■■□□□ 1.1
CPT1AP50416 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPT1AP50416 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.9■■□□□ 1.1
CPT1AP50416 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPT1AP50416 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.9■■□□□ 1.1
CPT1AP50416 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
CPT1AP50416 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CPT1AP50416 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
CPT1AP50416 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.89■■□□□ 1.1
CPT1AP50416 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.89■■□□□ 1.1
CPT1AP50416 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.89■■□□□ 1.09
CPT1AP50416 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPT1AP50416 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPT1AP50416 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.89■■□□□ 1.09
CPT1AP50416 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.89■■□□□ 1.09
CPT1AP50416 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.89■■□□□ 1.09
CPT1AP50416 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.89■■□□□ 1.09
CPT1AP50416 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.89■■□□□ 1.09
CPT1AP50416 SMG8-203ENST00000578922 2178 ntBASIC21.89■■□□□ 1.09
CPT1AP50416 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.89■■□□□ 1.09
CPT1AP50416 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPT1AP50416 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CPT1AP50416 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CPT1AP50416 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPT1AP50416 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.88■■□□□ 1.09
CPT1AP50416 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.88■■□□□ 1.09
CPT1AP50416 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.88■■□□□ 1.09
CPT1AP50416 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPT1AP50416 TMEM179-206ENST00000616017 1645 ntBASIC21.88■■□□□ 1.09
CPT1AP50416 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPT1AP50416 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPT1AP50416 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPT1AP50416 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPT1AP50416 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.88■■□□□ 1.09
CPT1AP50416 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.88■■□□□ 1.09
CPT1AP50416 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CPT1AP50416 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CPT1AP50416 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CPT1AP50416 FAM87A-204ENST00000613235 858 ntBASIC21.88■■□□□ 1.09
CPT1AP50416 AC006011.2-201ENST00000621313 1158 ntBASIC21.88■■□□□ 1.09
CPT1AP50416 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.88■■□□□ 1.09
CPT1AP50416 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPT1AP50416 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.88■■□□□ 1.09
CPT1AP50416 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.88■■□□□ 1.09
CPT1AP50416 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPT1AP50416 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPT1AP50416 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPT1AP50416 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CPT1AP50416 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.87■■□□□ 1.09
CPT1AP50416 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CPT1AP50416 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPT1AP50416 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.87■■□□□ 1.09
CPT1AP50416 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPT1AP50416 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPT1AP50416 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CPT1AP50416 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPT1AP50416 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CPT1AP50416 FAM207BP-201ENST00000447172 505 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms