Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
ATRXP46100 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATRXP46100 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.08■□□□□ 0.49
ATRXP46100 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
ATRXP46100 MRPL3P1-201ENST00000400109 1033 ntBASIC18.08■□□□□ 0.49
ATRXP46100 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.08■□□□□ 0.49
ATRXP46100 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.08■□□□□ 0.49
ATRXP46100 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATRXP46100 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.08■□□□□ 0.48
ATRXP46100 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.08■□□□□ 0.48
ATRXP46100 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.08■□□□□ 0.48
ATRXP46100 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATRXP46100 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATRXP46100 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATRXP46100 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATRXP46100 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATRXP46100 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ATRXP46100 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.07■□□□□ 0.48
ATRXP46100 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.07■□□□□ 0.48
ATRXP46100 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.07■□□□□ 0.48
ATRXP46100 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.07■□□□□ 0.48
ATRXP46100 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.07■□□□□ 0.48
ATRXP46100 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.07■□□□□ 0.48
ATRXP46100 RCC2P6-201ENST00000526625 1557 ntBASIC18.07■□□□□ 0.48
ATRXP46100 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATRXP46100 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATRXP46100 AC092338.2-201ENST00000568827 1415 ntBASIC18.07■□□□□ 0.48
ATRXP46100 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.07■□□□□ 0.48
ATRXP46100 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATRXP46100 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.07■□□□□ 0.48
ATRXP46100 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.07■□□□□ 0.48
ATRXP46100 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.07■□□□□ 0.48
ATRXP46100 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.07■□□□□ 0.48
ATRXP46100 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATRXP46100 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.07■□□□□ 0.48
ATRXP46100 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATRXP46100 AC096733.2-201ENST00000609937 1394 ntBASIC18.07■□□□□ 0.48
ATRXP46100 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ATRXP46100 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.07■□□□□ 0.48
ATRXP46100 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATRXP46100 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ATRXP46100 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
ATRXP46100 SLC25A1P1-201ENST00000528351 927 ntBASIC18.06■□□□□ 0.48
ATRXP46100 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
ATRXP46100 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.06■□□□□ 0.48
ATRXP46100 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
ATRXP46100 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.06■□□□□ 0.48
ATRXP46100 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATRXP46100 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATRXP46100 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATRXP46100 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATRXP46100 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATRXP46100 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATRXP46100 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATRXP46100 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.06■□□□□ 0.48
ATRXP46100 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.06■□□□□ 0.48
ATRXP46100 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.06■□□□□ 0.48
ATRXP46100 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.06■□□□□ 0.48
ATRXP46100 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATRXP46100 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.05■□□□□ 0.48
ATRXP46100 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATRXP46100 POLD2P1-201ENST00000511220 997 ntBASIC18.05■□□□□ 0.48
ATRXP46100 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.05■□□□□ 0.48
ATRXP46100 AL023973.1-201ENST00000624619 620 ntBASIC18.05■□□□□ 0.48
ATRXP46100 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
ATRXP46100 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
ATRXP46100 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATRXP46100 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ATRXP46100 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATRXP46100 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATRXP46100 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATRXP46100 AC079781.3-201ENST00000449110 356 ntBASIC18.05■□□□□ 0.48
ATRXP46100 AL441883.1-201ENST00000566170 1045 ntBASIC18.05■□□□□ 0.48
ATRXP46100 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.05■□□□□ 0.48
ATRXP46100 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATRXP46100 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ATRXP46100 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.04■□□□□ 0.48
ATRXP46100 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATRXP46100 AC127496.7-201ENST00000625110 1798 ntBASIC18.04■□□□□ 0.48
ATRXP46100 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATRXP46100 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATRXP46100 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.04■□□□□ 0.48
ATRXP46100 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.04■□□□□ 0.48
ATRXP46100 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ATRXP46100 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.04■□□□□ 0.48
ATRXP46100 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
ATRXP46100 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ATRXP46100 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.04■□□□□ 0.48
ATRXP46100 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.04■□□□□ 0.48
ATRXP46100 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.04■□□□□ 0.48
ATRXP46100 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATRXP46100 AC008040.2-201ENST00000461049 708 ntBASIC18.04■□□□□ 0.48
ATRXP46100 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.04■□□□□ 0.48
ATRXP46100 AC140113.3-201ENST00000605663 199 ntBASIC18.04■□□□□ 0.48
ATRXP46100 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.04■□□□□ 0.48
ATRXP46100 AC116562.4-202ENST00000641738 218 ntBASIC18.04■□□□□ 0.48
ATRXP46100 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.03■□□□□ 0.48
ATRXP46100 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ATRXP46100 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.03■□□□□ 0.48
ATRXP46100 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms