Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
MDH1P40925 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MDH1P40925 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.8■□□□□ 0.76
MDH1P40925 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
MDH1P40925 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
MDH1P40925 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.8■□□□□ 0.76
MDH1P40925 KRT16P2-201ENST00000414673 1423 ntBASIC19.8■□□□□ 0.76
MDH1P40925 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.8■□□□□ 0.76
MDH1P40925 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.8■□□□□ 0.76
MDH1P40925 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
MDH1P40925 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
MDH1P40925 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
MDH1P40925 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 AL031598.1-201ENST00000561511 1773 ntBASIC19.8■□□□□ 0.76
MDH1P40925 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MDH1P40925 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MDH1P40925 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.79■□□□□ 0.76
MDH1P40925 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
MDH1P40925 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.79■□□□□ 0.76
MDH1P40925 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.79■□□□□ 0.76
MDH1P40925 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MDH1P40925 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.79■□□□□ 0.76
MDH1P40925 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.79■□□□□ 0.76
MDH1P40925 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.79■□□□□ 0.76
MDH1P40925 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.79■□□□□ 0.76
MDH1P40925 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.79■□□□□ 0.76
MDH1P40925 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
MDH1P40925 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MDH1P40925 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MDH1P40925 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.78■□□□□ 0.76
MDH1P40925 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MDH1P40925 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MDH1P40925 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.78■□□□□ 0.76
MDH1P40925 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.78■□□□□ 0.76
MDH1P40925 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.78■□□□□ 0.76
MDH1P40925 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MDH1P40925 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MDH1P40925 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MDH1P40925 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MDH1P40925 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
MDH1P40925 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MDH1P40925 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MDH1P40925 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.78■□□□□ 0.76
MDH1P40925 RARRES2P1-201ENST00000474487 481 ntBASIC19.78■□□□□ 0.76
MDH1P40925 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
MDH1P40925 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MDH1P40925 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
MDH1P40925 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.78■□□□□ 0.76
MDH1P40925 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MDH1P40925 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.78■□□□□ 0.76
MDH1P40925 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MDH1P40925 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
MDH1P40925 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MDH1P40925 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MDH1P40925 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MDH1P40925 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.78■□□□□ 0.76
MDH1P40925 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
MDH1P40925 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
MDH1P40925 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MDH1P40925 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MDH1P40925 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MDH1P40925 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.77■□□□□ 0.76
MDH1P40925 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MDH1P40925 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
MDH1P40925 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MDH1P40925 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.77■□□□□ 0.76
MDH1P40925 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MDH1P40925 BX842568.3-201ENST00000418104 571 ntBASIC19.77■□□□□ 0.76
MDH1P40925 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
MDH1P40925 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.77■□□□□ 0.76
MDH1P40925 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
MDH1P40925 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms