Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM23P36406 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM23P36406 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
TRIM23P36406 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM23P36406 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.44■□□□□ 0.7
TRIM23P36406 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM23P36406 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM23P36406 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM23P36406 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM23P36406 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM23P36406 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM23P36406 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM23P36406 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRIM23P36406 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM23P36406 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRIM23P36406 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM23P36406 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM23P36406 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM23P36406 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM23P36406 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 AC026471.5-201ENST00000615068 467 ntBASIC19.43■□□□□ 0.7
TRIM23P36406 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM23P36406 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM23P36406 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM23P36406 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM23P36406 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM23P36406 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM23P36406 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM23P36406 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM23P36406 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRIM23P36406 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM23P36406 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM23P36406 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM23P36406 FAM197Y1-201ENST00000421178 764 ntBASIC19.42■□□□□ 0.7
TRIM23P36406 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM23P36406 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM23P36406 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.42■□□□□ 0.7
TRIM23P36406 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TRIM23P36406 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.42■□□□□ 0.7
TRIM23P36406 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.42■□□□□ 0.7
TRIM23P36406 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM23P36406 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM23P36406 TMEM179-206ENST00000616017 1645 ntBASIC19.42■□□□□ 0.7
TRIM23P36406 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM23P36406 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM23P36406 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM23P36406 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM23P36406 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM23P36406 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM23P36406 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM23P36406 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM23P36406 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM23P36406 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM23P36406 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM23P36406 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
TRIM23P36406 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM23P36406 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM23P36406 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM23P36406 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.41■□□□□ 0.7
TRIM23P36406 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM23P36406 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM23P36406 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM23P36406 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM23P36406 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM23P36406 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM23P36406 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM23P36406 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM23P36406 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM23P36406 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM23P36406 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRIM23P36406 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM23P36406 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 LINC01006-201ENST00000333319 2292 ntBASIC19.4■□□□□ 0.7
TRIM23P36406 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.4■□□□□ 0.7
TRIM23P36406 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM23P36406 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM23P36406 AP003071.4-201ENST00000562276 1284 ntBASIC19.4■□□□□ 0.7
TRIM23P36406 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms