Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.67■□□□□ 0.74
HMGCLP35914 ITM2C-210ENST00000620962 501 ntBASIC19.67■□□□□ 0.74
HMGCLP35914 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HMGCLP35914 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLP35914 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLP35914 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLP35914 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLP35914 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLP35914 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLP35914 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLP35914 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLP35914 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLP35914 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.66■□□□□ 0.74
HMGCLP35914 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.66■□□□□ 0.74
HMGCLP35914 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.66■□□□□ 0.74
HMGCLP35914 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.66■□□□□ 0.74
HMGCLP35914 RN7SL471P-201ENST00000580476 299 ntBASIC19.66■□□□□ 0.74
HMGCLP35914 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLP35914 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HMGCLP35914 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLP35914 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HMGCLP35914 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLP35914 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLP35914 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLP35914 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLP35914 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HMGCLP35914 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.65■□□□□ 0.74
HMGCLP35914 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HMGCLP35914 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLP35914 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.65■□□□□ 0.74
HMGCLP35914 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLP35914 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.65■□□□□ 0.74
HMGCLP35914 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.65■□□□□ 0.74
HMGCLP35914 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.65■□□□□ 0.74
HMGCLP35914 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLP35914 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
HMGCLP35914 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLP35914 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLP35914 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMGCLP35914 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMGCLP35914 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
HMGCLP35914 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HMGCLP35914 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLP35914 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLP35914 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGCLP35914 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HMGCLP35914 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGCLP35914 YBX1P10-201ENST00000444752 975 ntBASIC19.64■□□□□ 0.73
HMGCLP35914 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.64■□□□□ 0.73
HMGCLP35914 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.64■□□□□ 0.73
HMGCLP35914 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HMGCLP35914 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGCLP35914 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.64■□□□□ 0.73
HMGCLP35914 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLP35914 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLP35914 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLP35914 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLP35914 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGCLP35914 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
HMGCLP35914 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLP35914 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.64■□□□□ 0.73
HMGCLP35914 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGCLP35914 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
HMGCLP35914 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.63■□□□□ 0.73
HMGCLP35914 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
HMGCLP35914 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HMGCLP35914 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
HMGCLP35914 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.63■□□□□ 0.73
HMGCLP35914 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 ABHD17AP1-201ENST00000358206 933 ntBASIC19.63■□□□□ 0.73
HMGCLP35914 KRT18P29-201ENST00000397031 1267 ntBASIC19.63■□□□□ 0.73
HMGCLP35914 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.63■□□□□ 0.73
HMGCLP35914 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.63■□□□□ 0.73
HMGCLP35914 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.63■□□□□ 0.73
HMGCLP35914 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.63■□□□□ 0.73
HMGCLP35914 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLP35914 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLP35914 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLP35914 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.62■□□□□ 0.73
HMGCLP35914 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
HMGCLP35914 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLP35914 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLP35914 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLP35914 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLP35914 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.62■□□□□ 0.73
HMGCLP35914 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLP35914 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms