Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
RFC4P35249 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24.89■■□□□ 1.58
RFC4P35249 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC24.89■■□□□ 1.58
RFC4P35249 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.89■■□□□ 1.57
RFC4P35249 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.89■■□□□ 1.57
RFC4P35249 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
RFC4P35249 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RFC4P35249 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RFC4P35249 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RFC4P35249 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
RFC4P35249 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RFC4P35249 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.88■■□□□ 1.57
RFC4P35249 FP700111.2-201ENST00000619190 1892 ntBASIC24.88■■□□□ 1.57
RFC4P35249 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RFC4P35249 FAM86EP-206ENST00000510506 987 ntBASIC24.88■■□□□ 1.57
RFC4P35249 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.88■■□□□ 1.57
RFC4P35249 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC24.88■■□□□ 1.57
RFC4P35249 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.88■■□□□ 1.57
RFC4P35249 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.88■■□□□ 1.57
RFC4P35249 AL121956.5-201ENST00000625261 221 ntBASIC24.88■■□□□ 1.57
RFC4P35249 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RFC4P35249 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.88■■□□□ 1.57
RFC4P35249 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RFC4P35249 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
RFC4P35249 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RFC4P35249 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RFC4P35249 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RFC4P35249 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RFC4P35249 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.87■■□□□ 1.57
RFC4P35249 AC092338.2-201ENST00000568827 1415 ntBASIC24.87■■□□□ 1.57
RFC4P35249 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RFC4P35249 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RFC4P35249 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RFC4P35249 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RFC4P35249 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC24.87■■□□□ 1.57
RFC4P35249 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC24.87■■□□□ 1.57
RFC4P35249 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
RFC4P35249 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.87■■□□□ 1.57
RFC4P35249 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC24.87■■□□□ 1.57
RFC4P35249 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RFC4P35249 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RFC4P35249 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RFC4P35249 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RFC4P35249 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RFC4P35249 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RFC4P35249 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RFC4P35249 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RFC4P35249 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.86■■□□□ 1.57
RFC4P35249 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RFC4P35249 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RFC4P35249 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.86■■□□□ 1.57
RFC4P35249 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RFC4P35249 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC24.86■■□□□ 1.57
RFC4P35249 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC24.86■■□□□ 1.57
RFC4P35249 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC24.86■■□□□ 1.57
RFC4P35249 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.86■■□□□ 1.57
RFC4P35249 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC24.86■■□□□ 1.57
RFC4P35249 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RFC4P35249 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.86■■□□□ 1.57
RFC4P35249 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
RFC4P35249 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.85■■□□□ 1.57
RFC4P35249 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RFC4P35249 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RFC4P35249 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
RFC4P35249 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
RFC4P35249 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RFC4P35249 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC24.85■■□□□ 1.57
RFC4P35249 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC24.85■■□□□ 1.57
RFC4P35249 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.85■■□□□ 1.57
RFC4P35249 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.85■■□□□ 1.57
RFC4P35249 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.85■■□□□ 1.57
RFC4P35249 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
RFC4P35249 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RFC4P35249 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RFC4P35249 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFC4P35249 IER3-202ENST00000376377 1350 ntBASIC24.84■■□□□ 1.57
RFC4P35249 PHGDH-210ENST00000641115 1638 ntBASIC24.84■■□□□ 1.57
RFC4P35249 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFC4P35249 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFC4P35249 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.84■■□□□ 1.57
RFC4P35249 TSPY17P-201ENST00000450329 467 ntBASIC24.84■■□□□ 1.57
RFC4P35249 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC24.84■■□□□ 1.57
RFC4P35249 AL023803.3-201ENST00000615559 522 ntBASIC24.84■■□□□ 1.57
RFC4P35249 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC24.84■■□□□ 1.57
RFC4P35249 AL031432.5-201ENST00000641059 760 ntBASIC24.84■■□□□ 1.57
RFC4P35249 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFC4P35249 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RFC4P35249 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.84■■□□□ 1.57
RFC4P35249 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFC4P35249 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFC4P35249 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
RFC4P35249 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.83■■□□□ 1.57
RFC4P35249 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RFC4P35249 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.83■■□□□ 1.57
RFC4P35249 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.83■■□□□ 1.57
RFC4P35249 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RFC4P35249 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC24.83■■□□□ 1.57
RFC4P35249 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.83■■□□□ 1.57
RFC4P35249 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC24.83■■□□□ 1.57
RFC4P35249 AC093458.2-201ENST00000623150 629 ntBASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms