Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPA3P35244 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RPA3P35244 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPA3P35244 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPA3P35244 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPA3P35244 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPA3P35244 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPA3P35244 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPA3P35244 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
RPA3P35244 MIR663A-201ENST00000385250 93 ntBASIC19.9■□□□□ 0.78
RPA3P35244 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.9■□□□□ 0.78
RPA3P35244 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPA3P35244 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RPA3P35244 RAP2CP1-201ENST00000605103 478 ntBASIC19.9■□□□□ 0.78
RPA3P35244 FAM21FP-204ENST00000608637 956 ntBASIC19.9■□□□□ 0.78
RPA3P35244 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
RPA3P35244 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPA3P35244 AL032819.2-201ENST00000624543 2162 ntBASIC19.9■□□□□ 0.78
RPA3P35244 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RPA3P35244 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPA3P35244 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPA3P35244 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPA3P35244 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPA3P35244 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPA3P35244 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPA3P35244 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPA3P35244 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.89■□□□□ 0.77
RPA3P35244 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
RPA3P35244 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPA3P35244 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.89■□□□□ 0.77
RPA3P35244 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.89■□□□□ 0.77
RPA3P35244 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPA3P35244 AC006970.2-201ENST00000450065 779 ntBASIC19.89■□□□□ 0.77
RPA3P35244 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
RPA3P35244 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPA3P35244 AC016405.3-201ENST00000607710 860 ntBASIC19.89■□□□□ 0.77
RPA3P35244 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.89■□□□□ 0.77
RPA3P35244 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.89■□□□□ 0.77
RPA3P35244 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.89■□□□□ 0.77
RPA3P35244 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPA3P35244 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.88■□□□□ 0.77
RPA3P35244 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPA3P35244 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPA3P35244 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.88■□□□□ 0.77
RPA3P35244 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPA3P35244 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPA3P35244 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPA3P35244 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPA3P35244 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.88■□□□□ 0.77
RPA3P35244 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.88■□□□□ 0.77
RPA3P35244 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.88■□□□□ 0.77
RPA3P35244 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPA3P35244 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RPA3P35244 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RPA3P35244 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.87■□□□□ 0.77
RPA3P35244 AC009237.14-201ENST00000609975 1594 ntBASIC19.87■□□□□ 0.77
RPA3P35244 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RPA3P35244 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.87■□□□□ 0.77
RPA3P35244 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
RPA3P35244 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 RARRES2P4-201ENST00000514074 484 ntBASIC19.87■□□□□ 0.77
RPA3P35244 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.87■□□□□ 0.77
RPA3P35244 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.87■□□□□ 0.77
RPA3P35244 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.87■□□□□ 0.77
RPA3P35244 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RPA3P35244 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RPA3P35244 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPA3P35244 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RPA3P35244 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RPA3P35244 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPA3P35244 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPA3P35244 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPA3P35244 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPA3P35244 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPA3P35244 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPA3P35244 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.86■□□□□ 0.77
RPA3P35244 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPA3P35244 CROCCP5-201ENST00000436658 830 ntBASIC19.86■□□□□ 0.77
RPA3P35244 AC090192.1-201ENST00000517740 490 ntBASIC19.86■□□□□ 0.77
RPA3P35244 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPA3P35244 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.86■□□□□ 0.77
RPA3P35244 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPA3P35244 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RPA3P35244 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.86■□□□□ 0.77
RPA3P35244 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPA3P35244 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RPA3P35244 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms