Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNA3P32297 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNA3P32297 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.76■□□□□ 0.91
CHRNA3P32297 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.76■□□□□ 0.91
CHRNA3P32297 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNA3P32297 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNA3P32297 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNA3P32297 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNA3P32297 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
CHRNA3P32297 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNA3P32297 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNA3P32297 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNA3P32297 ABHD17AP1-201ENST00000358206 933 ntBASIC20.75■□□□□ 0.91
CHRNA3P32297 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNA3P32297 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.75■□□□□ 0.91
CHRNA3P32297 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNA3P32297 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNA3P32297 RNA5SP413-201ENST00000516373 109 ntBASIC20.75■□□□□ 0.91
CHRNA3P32297 TNXA-203ENST00000507684 2038 ntBASIC20.75■□□□□ 0.91
CHRNA3P32297 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.75■□□□□ 0.91
CHRNA3P32297 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.75■□□□□ 0.91
CHRNA3P32297 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.75■□□□□ 0.91
CHRNA3P32297 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.74■□□□□ 0.91
CHRNA3P32297 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNA3P32297 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNA3P32297 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.74■□□□□ 0.91
CHRNA3P32297 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNA3P32297 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.74■□□□□ 0.91
CHRNA3P32297 TSPY20P-201ENST00000450910 630 ntBASIC20.74■□□□□ 0.91
CHRNA3P32297 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.74■□□□□ 0.91
CHRNA3P32297 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.74■□□□□ 0.91
CHRNA3P32297 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNA3P32297 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNA3P32297 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.74■□□□□ 0.91
CHRNA3P32297 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNA3P32297 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.73■□□□□ 0.91
CHRNA3P32297 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA3P32297 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA3P32297 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.73■□□□□ 0.91
CHRNA3P32297 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA3P32297 AC009237.14-201ENST00000609975 1594 ntBASIC20.73■□□□□ 0.91
CHRNA3P32297 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA3P32297 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA3P32297 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA3P32297 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.73■□□□□ 0.91
CHRNA3P32297 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA3P32297 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA3P32297 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.73■□□□□ 0.91
CHRNA3P32297 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.73■□□□□ 0.91
CHRNA3P32297 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.73■□□□□ 0.91
CHRNA3P32297 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.73■□□□□ 0.91
CHRNA3P32297 MIR4651-201ENST00000582622 73 ntBASIC20.73■□□□□ 0.91
CHRNA3P32297 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.73■□□□□ 0.91
CHRNA3P32297 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA3P32297 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA3P32297 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA3P32297 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA3P32297 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA3P32297 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHRNA3P32297 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA3P32297 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA3P32297 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CHRNA3P32297 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.72■□□□□ 0.91
CHRNA3P32297 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA3P32297 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA3P32297 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CHRNA3P32297 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.72■□□□□ 0.91
CHRNA3P32297 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
CHRNA3P32297 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA3P32297 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.72■□□□□ 0.91
CHRNA3P32297 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.72■□□□□ 0.91
CHRNA3P32297 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA3P32297 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA3P32297 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA3P32297 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA3P32297 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA3P32297 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA3P32297 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.72■□□□□ 0.91
CHRNA3P32297 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.72■□□□□ 0.91
CHRNA3P32297 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA3P32297 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.72■□□□□ 0.91
CHRNA3P32297 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.72■□□□□ 0.91
CHRNA3P32297 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.72■□□□□ 0.91
CHRNA3P32297 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA3P32297 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA3P32297 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA3P32297 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA3P32297 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHRNA3P32297 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.71■□□□□ 0.91
CHRNA3P32297 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA3P32297 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.71■□□□□ 0.91
CHRNA3P32297 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.71■□□□□ 0.91
CHRNA3P32297 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.71■□□□□ 0.91
CHRNA3P32297 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA3P32297 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA3P32297 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA3P32297 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA3P32297 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA3P32297 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.71■□□□□ 0.91
CHRNA3P32297 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms