Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
GDF1P27539 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
GDF1P27539 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.88■□□□□ 0.45
GDF1P27539 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.88■□□□□ 0.45
GDF1P27539 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.88■□□□□ 0.45
GDF1P27539 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.88■□□□□ 0.45
GDF1P27539 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.88■□□□□ 0.45
GDF1P27539 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.88■□□□□ 0.45
GDF1P27539 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
GDF1P27539 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.87■□□□□ 0.45
GDF1P27539 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
GDF1P27539 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.87■□□□□ 0.45
GDF1P27539 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
GDF1P27539 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
GDF1P27539 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.87■□□□□ 0.45
GDF1P27539 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 YBX1P10-201ENST00000444752 975 ntBASIC17.87■□□□□ 0.45
GDF1P27539 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 AP002982.1-201ENST00000492365 877 ntBASIC17.87■□□□□ 0.45
GDF1P27539 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 AF186192.3-201ENST00000583427 947 ntBASIC17.87■□□□□ 0.45
GDF1P27539 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.87■□□□□ 0.45
GDF1P27539 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.87■□□□□ 0.45
GDF1P27539 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
GDF1P27539 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
GDF1P27539 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.87■□□□□ 0.45
GDF1P27539 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GDF1P27539 AL391422.3-201ENST00000603791 2761 ntBASIC17.86■□□□□ 0.45
GDF1P27539 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.86■□□□□ 0.45
GDF1P27539 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDF1P27539 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDF1P27539 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
GDF1P27539 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
GDF1P27539 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDF1P27539 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GDF1P27539 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.86■□□□□ 0.45
GDF1P27539 TSPY7P-201ENST00000431358 1114 ntBASIC17.86■□□□□ 0.45
GDF1P27539 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GDF1P27539 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDF1P27539 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.86■□□□□ 0.45
GDF1P27539 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.86■□□□□ 0.45
GDF1P27539 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.86■□□□□ 0.45
GDF1P27539 AC113410.3-201ENST00000623366 203 ntBASIC17.86■□□□□ 0.45
GDF1P27539 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GDF1P27539 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
GDF1P27539 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.86■□□□□ 0.45
GDF1P27539 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDF1P27539 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDF1P27539 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
GDF1P27539 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GDF1P27539 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDF1P27539 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDF1P27539 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDF1P27539 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
GDF1P27539 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GDF1P27539 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.85■□□□□ 0.45
GDF1P27539 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GDF1P27539 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.85■□□□□ 0.45
GDF1P27539 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.85■□□□□ 0.45
GDF1P27539 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.85■□□□□ 0.45
GDF1P27539 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.85■□□□□ 0.45
GDF1P27539 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.85■□□□□ 0.45
GDF1P27539 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.85■□□□□ 0.45
GDF1P27539 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.85■□□□□ 0.45
GDF1P27539 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GDF1P27539 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDF1P27539 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.85■□□□□ 0.45
GDF1P27539 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.85■□□□□ 0.45
GDF1P27539 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.85■□□□□ 0.45
GDF1P27539 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.85■□□□□ 0.45
GDF1P27539 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms