Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0CP27449 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0CP27449 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ATP6V0CP27449 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0CP27449 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.76■□□□□ 0.11
ATP6V0CP27449 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
ATP6V0CP27449 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0CP27449 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.76■□□□□ 0.11
ATP6V0CP27449 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0CP27449 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.76■□□□□ 0.11
ATP6V0CP27449 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0CP27449 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0CP27449 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ATP6V0CP27449 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0CP27449 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ATP6V0CP27449 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0CP27449 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.76■□□□□ 0.11
ATP6V0CP27449 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0CP27449 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0CP27449 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0CP27449 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0CP27449 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.75■□□□□ 0.11
ATP6V0CP27449 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
ATP6V0CP27449 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0CP27449 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ATP6V0CP27449 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.75■□□□□ 0.11
ATP6V0CP27449 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ATP6V0CP27449 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0CP27449 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0CP27449 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0CP27449 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ATP6V0CP27449 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0CP27449 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0CP27449 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
ATP6V0CP27449 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
ATP6V0CP27449 BX842568.3-201ENST00000418104 571 ntBASIC15.75■□□□□ 0.11
ATP6V0CP27449 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.75■□□□□ 0.11
ATP6V0CP27449 AC090164.3-201ENST00000610780 2143 ntBASIC15.75■□□□□ 0.11
ATP6V0CP27449 AC105233.4-201ENST00000642045 216 ntBASIC15.75■□□□□ 0.11
ATP6V0CP27449 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0CP27449 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0CP27449 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0CP27449 KRT16P2-201ENST00000414673 1423 ntBASIC15.75■□□□□ 0.11
ATP6V0CP27449 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.75■□□□□ 0.11
ATP6V0CP27449 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0CP27449 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.75■□□□□ 0.11
ATP6V0CP27449 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.75■□□□□ 0.11
ATP6V0CP27449 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0CP27449 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0CP27449 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0CP27449 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 AP000997.3-201ENST00000623333 2250 ntBASIC15.74■□□□□ 0.11
ATP6V0CP27449 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 IGHV3-19-201ENST00000521488 291 ntBASIC15.74■□□□□ 0.11
ATP6V0CP27449 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 AC006333.2-201ENST00000607957 2099 ntBASIC15.74■□□□□ 0.11
ATP6V0CP27449 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP6V0CP27449 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP6V0CP27449 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ATP6V0CP27449 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP6V0CP27449 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP6V0CP27449 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP6V0CP27449 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.73■□□□□ 0.11
ATP6V0CP27449 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP6V0CP27449 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP6V0CP27449 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP6V0CP27449 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP6V0CP27449 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP6V0CP27449 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP6V0CP27449 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.73■□□□□ 0.11
ATP6V0CP27449 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.73■□□□□ 0.11
ATP6V0CP27449 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms