Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.66■□□□□ 0.26
COL8A2P25067 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
COL8A2P25067 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COL8A2P25067 AF186192.3-201ENST00000583427 947 ntBASIC16.66■□□□□ 0.26
COL8A2P25067 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.66■□□□□ 0.26
COL8A2P25067 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COL8A2P25067 AC073314.1-201ENST00000568729 2216 ntBASIC16.66■□□□□ 0.26
COL8A2P25067 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.66■□□□□ 0.26
COL8A2P25067 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COL8A2P25067 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
COL8A2P25067 AC018553.1-201ENST00000616682 1458 ntBASIC16.66■□□□□ 0.26
COL8A2P25067 KRT17P2-201ENST00000300992 1314 ntBASIC16.66■□□□□ 0.26
COL8A2P25067 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COL8A2P25067 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL8A2P25067 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL8A2P25067 AC116351.2-201ENST00000606540 1585 ntBASIC16.65■□□□□ 0.26
COL8A2P25067 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
COL8A2P25067 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.65■□□□□ 0.26
COL8A2P25067 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.65■□□□□ 0.26
COL8A2P25067 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
COL8A2P25067 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL8A2P25067 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL8A2P25067 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.65■□□□□ 0.26
COL8A2P25067 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.65■□□□□ 0.26
COL8A2P25067 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL8A2P25067 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.65■□□□□ 0.26
COL8A2P25067 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.65■□□□□ 0.26
COL8A2P25067 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.65■□□□□ 0.26
COL8A2P25067 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.65■□□□□ 0.26
COL8A2P25067 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL8A2P25067 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.65■□□□□ 0.26
COL8A2P25067 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL8A2P25067 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL8A2P25067 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL8A2P25067 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COL8A2P25067 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
COL8A2P25067 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL8A2P25067 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL8A2P25067 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.65■□□□□ 0.26
COL8A2P25067 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COL8A2P25067 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COL8A2P25067 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
COL8A2P25067 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
COL8A2P25067 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL8A2P25067 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL8A2P25067 TFP1-202ENST00000475455 1573 ntBASIC16.64■□□□□ 0.25
COL8A2P25067 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL8A2P25067 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL8A2P25067 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COL8A2P25067 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL8A2P25067 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL8A2P25067 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.64■□□□□ 0.25
COL8A2P25067 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL8A2P25067 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COL8A2P25067 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL8A2P25067 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.64■□□□□ 0.25
COL8A2P25067 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.64■□□□□ 0.25
COL8A2P25067 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.64■□□□□ 0.25
COL8A2P25067 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.64■□□□□ 0.25
COL8A2P25067 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.64■□□□□ 0.25
COL8A2P25067 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.64■□□□□ 0.25
COL8A2P25067 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.64■□□□□ 0.25
COL8A2P25067 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.64■□□□□ 0.25
COL8A2P25067 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL8A2P25067 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.64■□□□□ 0.25
COL8A2P25067 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.64■□□□□ 0.25
COL8A2P25067 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.64■□□□□ 0.25
COL8A2P25067 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL8A2P25067 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.64■□□□□ 0.25
COL8A2P25067 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL8A2P25067 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL8A2P25067 AP006587.1-201ENST00000534129 1502 ntBASIC16.64■□□□□ 0.25
COL8A2P25067 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.64■□□□□ 0.25
COL8A2P25067 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.63■□□□□ 0.25
COL8A2P25067 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.63■□□□□ 0.25
COL8A2P25067 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
COL8A2P25067 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.63■□□□□ 0.25
COL8A2P25067 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
COL8A2P25067 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL8A2P25067 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms