Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRR1P24046 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRR1P24046 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRR1P24046 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GABRR1P24046 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRR1P24046 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRR1P24046 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.93■□□□□ 0.3
GABRR1P24046 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRR1P24046 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GABRR1P24046 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
GABRR1P24046 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.93■□□□□ 0.3
GABRR1P24046 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GABRR1P24046 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRR1P24046 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRR1P24046 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRR1P24046 TREX1-205ENST00000625293 1783 ntBASIC16.92■□□□□ 0.3
GABRR1P24046 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRR1P24046 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.92■□□□□ 0.3
GABRR1P24046 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GABRR1P24046 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRR1P24046 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRR1P24046 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.92■□□□□ 0.3
GABRR1P24046 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.92■□□□□ 0.3
GABRR1P24046 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.92■□□□□ 0.3
GABRR1P24046 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.92■□□□□ 0.3
GABRR1P24046 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.92■□□□□ 0.3
GABRR1P24046 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRR1P24046 AC100791.3-201ENST00000617619 330 ntBASIC16.92■□□□□ 0.3
GABRR1P24046 AC092437.1-201ENST00000624794 1048 ntBASIC16.92■□□□□ 0.3
GABRR1P24046 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRR1P24046 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
GABRR1P24046 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.92■□□□□ 0.3
GABRR1P24046 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRR1P24046 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.92■□□□□ 0.3
GABRR1P24046 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.92■□□□□ 0.3
GABRR1P24046 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
GABRR1P24046 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRR1P24046 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.92■□□□□ 0.3
GABRR1P24046 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRR1P24046 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GABRR1P24046 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRR1P24046 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRR1P24046 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.91■□□□□ 0.3
GABRR1P24046 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GABRR1P24046 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GABRR1P24046 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 AC098818.2-201ENST00000564925 2320 ntBASIC16.91■□□□□ 0.3
GABRR1P24046 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.91■□□□□ 0.3
GABRR1P24046 AC093484.2-201ENST00000580996 2166 ntBASIC16.91■□□□□ 0.3
GABRR1P24046 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRR1P24046 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRR1P24046 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRR1P24046 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRR1P24046 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRR1P24046 OR10C1-204ENST00000622521 1039 ntBASIC16.91■□□□□ 0.3
GABRR1P24046 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GABRR1P24046 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
GABRR1P24046 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRR1P24046 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRR1P24046 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABRR1P24046 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.9■□□□□ 0.3
GABRR1P24046 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRR1P24046 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRR1P24046 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABRR1P24046 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRR1P24046 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRR1P24046 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GABRR1P24046 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRR1P24046 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GABRR1P24046 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.9■□□□□ 0.3
GABRR1P24046 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRR1P24046 KRT18P68-201ENST00000392293 1000 ntBASIC16.9■□□□□ 0.3
GABRR1P24046 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRR1P24046 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.9■□□□□ 0.3
GABRR1P24046 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.9■□□□□ 0.3
GABRR1P24046 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABRR1P24046 AC005332.7-201ENST00000614046 2005 ntBASIC16.9■□□□□ 0.3
GABRR1P24046 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRR1P24046 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRR1P24046 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
GABRR1P24046 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GABRR1P24046 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.9■□□□□ 0.3
GABRR1P24046 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABRR1P24046 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms