Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF4P23510 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFSF4P23510 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TNFSF4P23510 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFSF4P23510 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.85■□□□□ 0.29
TNFSF4P23510 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF4P23510 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF4P23510 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF4P23510 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF4P23510 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF4P23510 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF4P23510 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TNFSF4P23510 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFSF4P23510 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFSF4P23510 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFSF4P23510 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF4P23510 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF4P23510 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF4P23510 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF4P23510 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TNFSF4P23510 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TNFSF4P23510 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFSF4P23510 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFSF4P23510 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.84■□□□□ 0.29
TNFSF4P23510 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF4P23510 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF4P23510 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TNFSF4P23510 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.84■□□□□ 0.29
TNFSF4P23510 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFSF4P23510 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF4P23510 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF4P23510 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF4P23510 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF4P23510 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.84■□□□□ 0.29
TNFSF4P23510 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF4P23510 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF4P23510 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
TNFSF4P23510 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TNFSF4P23510 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TNFSF4P23510 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF4P23510 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.83■□□□□ 0.28
TNFSF4P23510 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TNFSF4P23510 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF4P23510 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF4P23510 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF4P23510 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF4P23510 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TNFSF4P23510 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF4P23510 AC239809.2-201ENST00000415381 517 ntBASIC16.83■□□□□ 0.28
TNFSF4P23510 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.83■□□□□ 0.28
TNFSF4P23510 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF4P23510 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TNFSF4P23510 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF4P23510 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF4P23510 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF4P23510 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF4P23510 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF4P23510 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TNFSF4P23510 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.83■□□□□ 0.28
TNFSF4P23510 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.83■□□□□ 0.28
TNFSF4P23510 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF4P23510 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TNFSF4P23510 FAM197Y4-202ENST00000622692 608 ntBASIC16.83■□□□□ 0.28
TNFSF4P23510 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.83■□□□□ 0.28
TNFSF4P23510 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.83■□□□□ 0.28
TNFSF4P23510 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF4P23510 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFSF4P23510 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
TNFSF4P23510 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 AL162377.1-201ENST00000618844 1793 ntBASIC16.82■□□□□ 0.28
TNFSF4P23510 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFSF4P23510 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
TNFSF4P23510 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFSF4P23510 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFSF4P23510 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFSF4P23510 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.82■□□□□ 0.28
TNFSF4P23510 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TNFSF4P23510 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.82■□□□□ 0.28
TNFSF4P23510 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.82■□□□□ 0.28
TNFSF4P23510 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFSF4P23510 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
TNFSF4P23510 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TNFSF4P23510 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF4P23510 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TNFSF4P23510 AC124283.5-201ENST00000624661 1809 ntBASIC16.82■□□□□ 0.28
TNFSF4P23510 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TNFSF4P23510 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms