Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC092368.3-202ENST00000574180 1591 ntBASIC17.41■□□□□ 0.38
MSR1P21757 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MSR1P21757 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSR1P21757 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MSR1P21757 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
MSR1P21757 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSR1P21757 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSR1P21757 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSR1P21757 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.41■□□□□ 0.38
MSR1P21757 AC142086.2-201ENST00000569753 217 ntBASIC17.41■□□□□ 0.38
MSR1P21757 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MSR1P21757 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.41■□□□□ 0.38
MSR1P21757 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSR1P21757 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MSR1P21757 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSR1P21757 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSR1P21757 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MSR1P21757 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSR1P21757 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.41■□□□□ 0.38
MSR1P21757 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSR1P21757 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSR1P21757 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSR1P21757 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.41■□□□□ 0.38
MSR1P21757 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.41■□□□□ 0.38
MSR1P21757 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.41■□□□□ 0.38
MSR1P21757 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MSR1P21757 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.4■□□□□ 0.38
MSR1P21757 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MSR1P21757 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.4■□□□□ 0.38
MSR1P21757 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.4■□□□□ 0.38
MSR1P21757 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.4■□□□□ 0.38
MSR1P21757 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.4■□□□□ 0.38
MSR1P21757 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 AC060766.5-201ENST00000590539 871 ntBASIC17.4■□□□□ 0.38
MSR1P21757 AC083880.1-201ENST00000608266 535 ntBASIC17.4■□□□□ 0.38
MSR1P21757 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.4■□□□□ 0.38
MSR1P21757 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MSR1P21757 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MSR1P21757 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.39■□□□□ 0.38
MSR1P21757 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MSR1P21757 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.38
MSR1P21757 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
MSR1P21757 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
MSR1P21757 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.39■□□□□ 0.38
MSR1P21757 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MSR1P21757 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
MSR1P21757 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.39■□□□□ 0.37
MSR1P21757 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MSR1P21757 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSR1P21757 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSR1P21757 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MSR1P21757 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSR1P21757 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.39■□□□□ 0.37
MSR1P21757 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.39■□□□□ 0.37
MSR1P21757 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.39■□□□□ 0.37
MSR1P21757 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.39■□□□□ 0.37
MSR1P21757 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.39■□□□□ 0.37
MSR1P21757 AC006557.6-201ENST00000623071 864 ntBASIC17.39■□□□□ 0.37
MSR1P21757 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.39■□□□□ 0.37
MSR1P21757 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.39■□□□□ 0.37
MSR1P21757 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSR1P21757 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.39■□□□□ 0.37
MSR1P21757 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSR1P21757 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.39■□□□□ 0.37
MSR1P21757 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSR1P21757 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 AC018553.1-201ENST00000616682 1458 ntBASIC17.38■□□□□ 0.37
MSR1P21757 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.38■□□□□ 0.37
MSR1P21757 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
MSR1P21757 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
MSR1P21757 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.38■□□□□ 0.37
MSR1P21757 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 AC116351.2-201ENST00000606540 1585 ntBASIC17.38■□□□□ 0.37
MSR1P21757 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 AL355802.2-201ENST00000402069 882 ntBASIC17.38■□□□□ 0.37
MSR1P21757 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms