Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KRT4P19013 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.76■□□□□ 0.75
KRT4P19013 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT4P19013 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.76■□□□□ 0.75
KRT4P19013 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
KRT4P19013 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT4P19013 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT4P19013 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT4P19013 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT4P19013 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT4P19013 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT4P19013 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT4P19013 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
KRT4P19013 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT4P19013 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT4P19013 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
KRT4P19013 YBX1P1-201ENST00000445822 960 ntBASIC19.75■□□□□ 0.75
KRT4P19013 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT4P19013 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.75■□□□□ 0.75
KRT4P19013 KRT18P14-201ENST00000534205 1250 ntBASIC19.75■□□□□ 0.75
KRT4P19013 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.75■□□□□ 0.75
KRT4P19013 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT4P19013 AL591742.1-201ENST00000604433 565 ntBASIC19.75■□□□□ 0.75
KRT4P19013 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT4P19013 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT4P19013 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT4P19013 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
KRT4P19013 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT4P19013 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT4P19013 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT4P19013 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT4P19013 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
KRT4P19013 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
KRT4P19013 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT4P19013 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT4P19013 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT4P19013 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT4P19013 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KRT4P19013 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
KRT4P19013 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT4P19013 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT4P19013 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT4P19013 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
KRT4P19013 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT4P19013 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT4P19013 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT4P19013 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT4P19013 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT4P19013 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.74■□□□□ 0.75
KRT4P19013 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.74■□□□□ 0.75
KRT4P19013 AL031963.3-201ENST00000606441 850 ntBASIC19.74■□□□□ 0.75
KRT4P19013 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT4P19013 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
KRT4P19013 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT4P19013 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT4P19013 KRT8P20-201ENST00000423953 1409 ntBASIC19.74■□□□□ 0.75
KRT4P19013 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT4P19013 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KRT4P19013 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT4P19013 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT4P19013 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT4P19013 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT4P19013 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
KRT4P19013 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT4P19013 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.73■□□□□ 0.75
KRT4P19013 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT4P19013 KRT19P1-201ENST00000405746 1186 ntBASIC19.73■□□□□ 0.75
KRT4P19013 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.73■□□□□ 0.75
KRT4P19013 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT4P19013 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT4P19013 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.73■□□□□ 0.75
KRT4P19013 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT4P19013 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT4P19013 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
KRT4P19013 AL138781.2-201ENST00000617896 1843 ntBASIC19.72■□□□□ 0.75
KRT4P19013 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
KRT4P19013 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
KRT4P19013 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.72■□□□□ 0.75
KRT4P19013 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.72■□□□□ 0.75
KRT4P19013 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms