Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC2P18074 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC2P18074 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ERCC2P18074 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC2P18074 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC2P18074 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC2P18074 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
ERCC2P18074 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC2P18074 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ERCC2P18074 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC2P18074 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
ERCC2P18074 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.31■□□□□ 0.84
ERCC2P18074 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.31■□□□□ 0.84
ERCC2P18074 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ERCC2P18074 AL121906.2-201ENST00000621597 723 ntBASIC20.31■□□□□ 0.84
ERCC2P18074 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC2P18074 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ERCC2P18074 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC2P18074 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC2P18074 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC2P18074 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC2P18074 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.31■□□□□ 0.84
ERCC2P18074 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC2P18074 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC2P18074 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ERCC2P18074 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC2P18074 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC2P18074 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC2P18074 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC2P18074 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.3■□□□□ 0.84
ERCC2P18074 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC2P18074 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC2P18074 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC2P18074 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.3■□□□□ 0.84
ERCC2P18074 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC2P18074 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC2P18074 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.3■□□□□ 0.84
ERCC2P18074 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.3■□□□□ 0.84
ERCC2P18074 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC2P18074 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC2P18074 AL158211.5-201ENST00000623583 2518 ntBASIC20.3■□□□□ 0.84
ERCC2P18074 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.3■□□□□ 0.84
ERCC2P18074 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC2P18074 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.3■□□□□ 0.84
ERCC2P18074 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ERCC2P18074 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC2P18074 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
ERCC2P18074 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ERCC2P18074 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ERCC2P18074 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC2P18074 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
ERCC2P18074 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC2P18074 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ERCC2P18074 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
ERCC2P18074 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.29■□□□□ 0.84
ERCC2P18074 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC2P18074 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC2P18074 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC2P18074 ESRRAP1-201ENST00000400596 1257 ntBASIC20.29■□□□□ 0.84
ERCC2P18074 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC2P18074 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.29■□□□□ 0.84
ERCC2P18074 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.29■□□□□ 0.84
ERCC2P18074 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.29■□□□□ 0.84
ERCC2P18074 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC2P18074 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC2P18074 AL121829.2-201ENST00000620908 328 ntBASIC20.29■□□□□ 0.84
ERCC2P18074 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.29■□□□□ 0.84
ERCC2P18074 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ERCC2P18074 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.29■□□□□ 0.84
ERCC2P18074 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC2P18074 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.28■□□□□ 0.84
ERCC2P18074 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC2P18074 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC2P18074 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.28■□□□□ 0.84
ERCC2P18074 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.28■□□□□ 0.84
ERCC2P18074 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.28■□□□□ 0.84
ERCC2P18074 MIR4651-201ENST00000582622 73 ntBASIC20.28■□□□□ 0.84
ERCC2P18074 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC2P18074 TREX1-205ENST00000625293 1783 ntBASIC20.28■□□□□ 0.84
ERCC2P18074 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ERCC2P18074 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
ERCC2P18074 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC2P18074 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC2P18074 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
ERCC2P18074 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC2P18074 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC2P18074 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC2P18074 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC2P18074 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ERCC2P18074 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ERCC2P18074 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC2P18074 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC2P18074 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC2P18074 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ERCC2P18074 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC2P18074 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.27■□□□□ 0.84
ERCC2P18074 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ERCC2P18074 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC2P18074 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC2P18074 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms