Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PNMA6B-201ENST00000538162 1200 ntBASIC20.44■□□□□ 0.86
CD48P09326 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.44■□□□□ 0.86
CD48P09326 AC133041.1-202ENST00000642053 222 ntBASIC20.44■□□□□ 0.86
CD48P09326 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD48P09326 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CD48P09326 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CD48P09326 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CD48P09326 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CD48P09326 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.43■□□□□ 0.86
CD48P09326 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD48P09326 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD48P09326 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD48P09326 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD48P09326 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CD48P09326 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD48P09326 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD48P09326 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD48P09326 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.43■□□□□ 0.86
CD48P09326 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.43■□□□□ 0.86
CD48P09326 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.43■□□□□ 0.86
CD48P09326 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD48P09326 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.43■□□□□ 0.86
CD48P09326 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.43■□□□□ 0.86
CD48P09326 AC060766.5-201ENST00000590539 871 ntBASIC20.43■□□□□ 0.86
CD48P09326 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CD48P09326 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD48P09326 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.43■□□□□ 0.86
CD48P09326 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CD48P09326 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CD48P09326 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.43■□□□□ 0.86
CD48P09326 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD48P09326 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD48P09326 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 TFP1-202ENST00000475455 1573 ntBASIC20.42■□□□□ 0.86
CD48P09326 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.42■□□□□ 0.86
CD48P09326 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CD48P09326 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.42■□□□□ 0.86
CD48P09326 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.42■□□□□ 0.86
CD48P09326 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.42■□□□□ 0.86
CD48P09326 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CD48P09326 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.42■□□□□ 0.86
CD48P09326 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.42■□□□□ 0.86
CD48P09326 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.42■□□□□ 0.86
CD48P09326 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.42■□□□□ 0.86
CD48P09326 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.42■□□□□ 0.86
CD48P09326 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD48P09326 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.42■□□□□ 0.86
CD48P09326 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CD48P09326 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD48P09326 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD48P09326 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.41■□□□□ 0.86
CD48P09326 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.41■□□□□ 0.86
CD48P09326 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CD48P09326 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CD48P09326 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CD48P09326 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CD48P09326 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.41■□□□□ 0.86
CD48P09326 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.41■□□□□ 0.86
CD48P09326 RPS2P52-201ENST00000469610 820 ntBASIC20.41■□□□□ 0.86
CD48P09326 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.41■□□□□ 0.86
CD48P09326 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.41■□□□□ 0.86
CD48P09326 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CD48P09326 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD48P09326 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD48P09326 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CD48P09326 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD48P09326 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CD48P09326 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CD48P09326 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD48P09326 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CD48P09326 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD48P09326 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD48P09326 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD48P09326 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD48P09326 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD48P09326 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD48P09326 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD48P09326 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD48P09326 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.4■□□□□ 0.86
CD48P09326 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.4■□□□□ 0.86
CD48P09326 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.4■□□□□ 0.86
CD48P09326 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD48P09326 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.4■□□□□ 0.86
CD48P09326 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD48P09326 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.4■□□□□ 0.86
CD48P09326 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CD48P09326 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms