Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A1P02452 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A1P02452 ARMC10P1-201ENST00000313754 855 ntBASIC23.84■■□□□ 1.41
COL1A1P02452 MIR1238-201ENST00000408483 83 ntBASIC23.84■■□□□ 1.41
COL1A1P02452 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.84■■□□□ 1.41
COL1A1P02452 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
COL1A1P02452 FITM1-202ENST00000559294 800 ntBASIC23.84■■□□□ 1.41
COL1A1P02452 NAPSB-206ENST00000562112 1266 ntBASIC23.84■■□□□ 1.41
COL1A1P02452 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A1P02452 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A1P02452 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.84■■□□□ 1.41
COL1A1P02452 LINC01568-207ENST00000641790 1380 ntBASIC23.84■■□□□ 1.41
COL1A1P02452 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A1P02452 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL1A1P02452 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.83■■□□□ 1.41
COL1A1P02452 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.83■■□□□ 1.41
COL1A1P02452 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC23.83■■□□□ 1.41
COL1A1P02452 AC004980.1-204ENST00000429707 299 ntBASIC23.83■■□□□ 1.41
COL1A1P02452 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.83■■□□□ 1.41
COL1A1P02452 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL1A1P02452 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC23.83■■□□□ 1.41
COL1A1P02452 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.83■■□□□ 1.41
COL1A1P02452 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.83■■□□□ 1.41
COL1A1P02452 AC026271.3-201ENST00000571884 352 ntBASIC23.83■■□□□ 1.41
COL1A1P02452 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.83■■□□□ 1.41
COL1A1P02452 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL1A1P02452 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL1A1P02452 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL1A1P02452 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL1A1P02452 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL1A1P02452 FEM1AP1-201ENST00000431297 1995 ntBASIC23.83■■□□□ 1.41
COL1A1P02452 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
COL1A1P02452 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.4
COL1A1P02452 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL1A1P02452 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL1A1P02452 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL1A1P02452 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL1A1P02452 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.82■■□□□ 1.4
COL1A1P02452 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL1A1P02452 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL1A1P02452 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL1A1P02452 RBM42-202ENST00000586618 771 ntTSL 3 BASIC23.82■■□□□ 1.4
COL1A1P02452 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL1A1P02452 HLA-A-209ENST00000638375 975 ntBASIC23.82■■□□□ 1.4
COL1A1P02452 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL1A1P02452 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL1A1P02452 TMEM179-206ENST00000616017 1645 ntBASIC23.82■■□□□ 1.4
COL1A1P02452 AC092667.1-201ENST00000434301 2586 ntBASIC23.82■■□□□ 1.4
COL1A1P02452 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A1P02452 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.81■■□□□ 1.4
COL1A1P02452 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.81■■□□□ 1.4
COL1A1P02452 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.81■■□□□ 1.4
COL1A1P02452 KRT18P57-201ENST00000443599 1254 ntBASIC23.81■■□□□ 1.4
COL1A1P02452 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.81■■□□□ 1.4
COL1A1P02452 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.81■■□□□ 1.4
COL1A1P02452 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.81■■□□□ 1.4
COL1A1P02452 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
COL1A1P02452 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A1P02452 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A1P02452 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A1P02452 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A1P02452 KRT18P22-201ENST00000402024 1347 ntBASIC23.81■■□□□ 1.4
COL1A1P02452 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A1P02452 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC23.81■■□□□ 1.4
COL1A1P02452 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.81■■□□□ 1.4
COL1A1P02452 SLC25A3P1-201ENST00000443844 931 ntBASIC23.81■■□□□ 1.4
COL1A1P02452 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A1P02452 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A1P02452 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.81■■□□□ 1.4
COL1A1P02452 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
COL1A1P02452 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.8■■□□□ 1.4
COL1A1P02452 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A1P02452 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
COL1A1P02452 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.8■■□□□ 1.4
COL1A1P02452 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A1P02452 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A1P02452 AC073508.3-201ENST00000619697 1419 ntBASIC23.8■■□□□ 1.4
COL1A1P02452 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
COL1A1P02452 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.8■■□□□ 1.4
COL1A1P02452 TUBB8P6-201ENST00000436895 1288 ntBASIC23.8■■□□□ 1.4
COL1A1P02452 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A1P02452 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A1P02452 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A1P02452 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A1P02452 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A1P02452 AL691432.2-201ENST00000607222 2038 ntBASIC23.79■■□□□ 1.4
COL1A1P02452 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
COL1A1P02452 CYP2D8P-201ENST00000433633 1490 ntBASIC23.79■■□□□ 1.4
COL1A1P02452 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL1A1P02452 AL391422.3-201ENST00000603791 2761 ntBASIC23.79■■□□□ 1.4
COL1A1P02452 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL1A1P02452 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL1A1P02452 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL1A1P02452 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
COL1A1P02452 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.79■■□□□ 1.4
COL1A1P02452 B3GAT3P1-201ENST00000471720 806 ntBASIC23.79■■□□□ 1.4
COL1A1P02452 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
COL1A1P02452 AC010947.1-201ENST00000623454 693 ntBASIC23.79■■□□□ 1.4
COL1A1P02452 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL1A1P02452 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms