Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.84■■□□□ 1.09
CD4P01730 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD4P01730 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CD4P01730 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD4P01730 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD4P01730 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CD4P01730 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD4P01730 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CD4P01730 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD4P01730 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CD4P01730 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.83■■□□□ 1.09
CD4P01730 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CD4P01730 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD4P01730 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD4P01730 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CD4P01730 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD4P01730 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.83■■□□□ 1.09
CD4P01730 AK4P3-201ENST00000418260 669 ntBASIC21.83■■□□□ 1.09
CD4P01730 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.83■■□□□ 1.09
CD4P01730 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.83■■□□□ 1.09
CD4P01730 AC022616.7-201ENST00000525383 220 ntBASIC21.83■■□□□ 1.09
CD4P01730 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.83■■□□□ 1.09
CD4P01730 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CD4P01730 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.83■■□□□ 1.09
CD4P01730 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD4P01730 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CD4P01730 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD4P01730 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CD4P01730 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.83■■□□□ 1.08
CD4P01730 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.83■■□□□ 1.08
CD4P01730 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CD4P01730 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CD4P01730 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.83■■□□□ 1.08
CD4P01730 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD4P01730 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.82■■□□□ 1.08
CD4P01730 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD4P01730 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD4P01730 CRYGFP-201ENST00000418459 633 ntBASIC21.82■■□□□ 1.08
CD4P01730 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.82■■□□□ 1.08
CD4P01730 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD4P01730 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CD4P01730 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD4P01730 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD4P01730 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CD4P01730 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CD4P01730 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD4P01730 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD4P01730 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD4P01730 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD4P01730 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.81■■□□□ 1.08
CD4P01730 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CD4P01730 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD4P01730 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CD4P01730 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD4P01730 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD4P01730 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD4P01730 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.81■■□□□ 1.08
CD4P01730 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD4P01730 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CD4P01730 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CD4P01730 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CD4P01730 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD4P01730 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CD4P01730 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD4P01730 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.8■■□□□ 1.08
CD4P01730 AC116351.2-201ENST00000606540 1585 ntBASIC21.8■■□□□ 1.08
CD4P01730 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CD4P01730 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD4P01730 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CD4P01730 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD4P01730 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.8■■□□□ 1.08
CD4P01730 KRT18P16-201ENST00000510337 1294 ntBASIC21.8■■□□□ 1.08
CD4P01730 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD4P01730 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD4P01730 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.8■■□□□ 1.08
CD4P01730 AC130371.2-201ENST00000619443 611 ntBASIC21.8■■□□□ 1.08
CD4P01730 AC131212.4-201ENST00000623606 975 ntBASIC21.8■■□□□ 1.08
CD4P01730 AL358472.4-201ENST00000633140 710 ntBASIC21.8■■□□□ 1.08
CD4P01730 MYC-208ENST00000641036 567 ntBASIC21.8■■□□□ 1.08
CD4P01730 AL121603.2-201ENST00000557373 2117 ntBASIC21.8■■□□□ 1.08
CD4P01730 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.8■■□□□ 1.08
CD4P01730 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CD4P01730 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD4P01730 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CD4P01730 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CD4P01730 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD4P01730 TFP1-202ENST00000475455 1573 ntBASIC21.79■■□□□ 1.08
CD4P01730 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CD4P01730 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CD4P01730 AC117947.1-201ENST00000427448 529 ntBASIC21.79■■□□□ 1.08
CD4P01730 YBX1P10-201ENST00000444752 975 ntBASIC21.79■■□□□ 1.08
CD4P01730 AC091390.4-202ENST00000476426 537 ntBASIC21.79■■□□□ 1.08
CD4P01730 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.79■■□□□ 1.08
CD4P01730 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.79■■□□□ 1.08
CD4P01730 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.79■■□□□ 1.08
CD4P01730 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.79■■□□□ 1.08
CD4P01730 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
CD4P01730 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.79■■□□□ 1.08
CD4P01730 FP700111.2-201ENST00000619190 1892 ntBASIC21.79■■□□□ 1.08
CD4P01730 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms