Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.5■□□□□ 0.39
CNOT4O95628 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CNOT4O95628 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT4O95628 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.5■□□□□ 0.39
CNOT4O95628 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.5■□□□□ 0.39
CNOT4O95628 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT4O95628 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.5■□□□□ 0.39
CNOT4O95628 GABARAPL3-202ENST00000624044 1851 ntBASIC17.5■□□□□ 0.39
CNOT4O95628 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CNOT4O95628 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CNOT4O95628 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CNOT4O95628 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.49■□□□□ 0.39
CNOT4O95628 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT4O95628 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CNOT4O95628 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.49■□□□□ 0.39
CNOT4O95628 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.49■□□□□ 0.39
CNOT4O95628 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.49■□□□□ 0.39
CNOT4O95628 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.49■□□□□ 0.39
CNOT4O95628 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.49■□□□□ 0.39
CNOT4O95628 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.49■□□□□ 0.39
CNOT4O95628 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT4O95628 MIR4497-201ENST00000583208 89 ntBASIC17.49■□□□□ 0.39
CNOT4O95628 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT4O95628 AC124016.1-201ENST00000609552 612 ntBASIC17.49■□□□□ 0.39
CNOT4O95628 AC110285.5-201ENST00000611501 352 ntBASIC17.49■□□□□ 0.39
CNOT4O95628 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT4O95628 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT4O95628 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT4O95628 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT4O95628 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT4O95628 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT4O95628 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT4O95628 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT4O95628 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT4O95628 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.48■□□□□ 0.39
CNOT4O95628 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.48■□□□□ 0.39
CNOT4O95628 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.48■□□□□ 0.39
CNOT4O95628 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.48■□□□□ 0.39
CNOT4O95628 AC073912.3-201ENST00000624414 853 ntBASIC17.48■□□□□ 0.39
CNOT4O95628 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT4O95628 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT4O95628 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.48■□□□□ 0.39
CNOT4O95628 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.48■□□□□ 0.39
CNOT4O95628 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT4O95628 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CNOT4O95628 AC116351.2-201ENST00000606540 1585 ntBASIC17.48■□□□□ 0.39
CNOT4O95628 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNOT4O95628 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.48■□□□□ 0.39
CNOT4O95628 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT4O95628 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CNOT4O95628 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT4O95628 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT4O95628 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT4O95628 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT4O95628 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CNOT4O95628 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT4O95628 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.47■□□□□ 0.39
CNOT4O95628 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CNOT4O95628 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CNOT4O95628 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT4O95628 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CNOT4O95628 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT4O95628 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT4O95628 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CNOT4O95628 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CNOT4O95628 AL023875.1-201ENST00000640777 796 ntBASIC17.47■□□□□ 0.39
CNOT4O95628 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT4O95628 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CNOT4O95628 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT4O95628 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT4O95628 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT4O95628 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT4O95628 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT4O95628 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT4O95628 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT4O95628 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT4O95628 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT4O95628 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms