Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG5O95196 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.17■□□□□ 0.98
CSPG5O95196 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG5O95196 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG5O95196 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
CSPG5O95196 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG5O95196 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG5O95196 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG5O95196 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG5O95196 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.16■□□□□ 0.98
CSPG5O95196 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSPG5O95196 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CSPG5O95196 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSPG5O95196 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.16■□□□□ 0.98
CSPG5O95196 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSPG5O95196 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSPG5O95196 PTBP1P-201ENST00000554374 1601 ntBASIC21.16■□□□□ 0.98
CSPG5O95196 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSPG5O95196 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CSPG5O95196 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.16■□□□□ 0.98
CSPG5O95196 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSPG5O95196 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.16■□□□□ 0.98
CSPG5O95196 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CSPG5O95196 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSPG5O95196 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSPG5O95196 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSPG5O95196 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CSPG5O95196 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG5O95196 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.15■□□□□ 0.98
CSPG5O95196 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CSPG5O95196 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.15■□□□□ 0.98
CSPG5O95196 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.15■□□□□ 0.98
CSPG5O95196 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CSPG5O95196 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CSPG5O95196 KRT8P20-201ENST00000423953 1409 ntBASIC21.15■□□□□ 0.98
CSPG5O95196 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG5O95196 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.15■□□□□ 0.98
CSPG5O95196 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG5O95196 INGX-201ENST00000359239 846 ntBASIC21.15■□□□□ 0.98
CSPG5O95196 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.15■□□□□ 0.98
CSPG5O95196 CRYGFP-201ENST00000418459 633 ntBASIC21.15■□□□□ 0.98
CSPG5O95196 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.15■□□□□ 0.98
CSPG5O95196 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.15■□□□□ 0.98
CSPG5O95196 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.15■□□□□ 0.98
CSPG5O95196 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.15■□□□□ 0.98
CSPG5O95196 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG5O95196 AC244015.2-201ENST00000616358 1861 ntBASIC21.15■□□□□ 0.98
CSPG5O95196 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG5O95196 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG5O95196 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG5O95196 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.14■□□□□ 0.98
CSPG5O95196 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CSPG5O95196 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CSPG5O95196 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CSPG5O95196 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.14■□□□□ 0.98
CSPG5O95196 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CSPG5O95196 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CSPG5O95196 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG5O95196 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.14■□□□□ 0.97
CSPG5O95196 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.14■□□□□ 0.97
CSPG5O95196 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.14■□□□□ 0.97
CSPG5O95196 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.14■□□□□ 0.97
CSPG5O95196 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG5O95196 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CSPG5O95196 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG5O95196 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG5O95196 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG5O95196 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CSPG5O95196 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.14■□□□□ 0.97
CSPG5O95196 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG5O95196 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CSPG5O95196 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.13■□□□□ 0.97
CSPG5O95196 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.13■□□□□ 0.97
CSPG5O95196 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.13■□□□□ 0.97
CSPG5O95196 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.13■□□□□ 0.97
CSPG5O95196 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSPG5O95196 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.13■□□□□ 0.97
CSPG5O95196 AL031985.4-201ENST00000642138 673 ntBASIC21.13■□□□□ 0.97
CSPG5O95196 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSPG5O95196 AF106564.1-201ENST00000607058 2553 ntBASIC21.13■□□□□ 0.97
CSPG5O95196 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.13■□□□□ 0.97
CSPG5O95196 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CSPG5O95196 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.13■□□□□ 0.97
CSPG5O95196 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.13■□□□□ 0.97
CSPG5O95196 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.12■□□□□ 0.97
CSPG5O95196 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CSPG5O95196 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG5O95196 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CSPG5O95196 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.12■□□□□ 0.97
CSPG5O95196 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG5O95196 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG5O95196 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CSPG5O95196 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG5O95196 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG5O95196 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.12■□□□□ 0.97
CSPG5O95196 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.12■□□□□ 0.97
CSPG5O95196 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG5O95196 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.12■□□□□ 0.97
CSPG5O95196 C2orf69P3-201ENST00000565542 1120 ntBASIC21.12■□□□□ 0.97
CSPG5O95196 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms