Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP200O75643 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP200O75643 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP200O75643 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.91■□□□□ 0.62
SNRNP200O75643 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.91■□□□□ 0.62
SNRNP200O75643 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.91■□□□□ 0.62
SNRNP200O75643 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.91■□□□□ 0.62
SNRNP200O75643 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP200O75643 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP200O75643 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SNRNP200O75643 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP200O75643 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SNRNP200O75643 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SNRNP200O75643 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP200O75643 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.91■□□□□ 0.62
SNRNP200O75643 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.91■□□□□ 0.62
SNRNP200O75643 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SNRNP200O75643 RN7SL471P-201ENST00000580476 299 ntBASIC18.91■□□□□ 0.62
SNRNP200O75643 AL049637.2-201ENST00000641778 930 ntBASIC18.91■□□□□ 0.62
SNRNP200O75643 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNRNP200O75643 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP200O75643 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP200O75643 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
SNRNP200O75643 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP200O75643 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.9■□□□□ 0.62
SNRNP200O75643 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP200O75643 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
SNRNP200O75643 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP200O75643 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SNRNP200O75643 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP200O75643 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.9■□□□□ 0.62
SNRNP200O75643 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.9■□□□□ 0.62
SNRNP200O75643 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP200O75643 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP200O75643 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.9■□□□□ 0.62
SNRNP200O75643 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP200O75643 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNRNP200O75643 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SNRNP200O75643 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNRNP200O75643 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNRNP200O75643 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.89■□□□□ 0.61
SNRNP200O75643 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP200O75643 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
SNRNP200O75643 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP200O75643 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
SNRNP200O75643 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP200O75643 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP200O75643 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP200O75643 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SNRNP200O75643 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP200O75643 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP200O75643 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.89■□□□□ 0.61
SNRNP200O75643 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP200O75643 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP200O75643 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNRNP200O75643 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP200O75643 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SNRNP200O75643 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SNRNP200O75643 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.88■□□□□ 0.61
SNRNP200O75643 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.88■□□□□ 0.61
SNRNP200O75643 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.88■□□□□ 0.61
SNRNP200O75643 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP200O75643 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SNRNP200O75643 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SNRNP200O75643 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.88■□□□□ 0.61
SNRNP200O75643 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.88■□□□□ 0.61
SNRNP200O75643 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP200O75643 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP200O75643 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP200O75643 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.88■□□□□ 0.61
SNRNP200O75643 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP200O75643 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SNRNP200O75643 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP200O75643 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SNRNP200O75643 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP200O75643 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP200O75643 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.88■□□□□ 0.61
SNRNP200O75643 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP200O75643 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.87■□□□□ 0.61
SNRNP200O75643 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP200O75643 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP200O75643 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP200O75643 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SNRNP200O75643 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP200O75643 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP200O75643 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.87■□□□□ 0.61
SNRNP200O75643 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.87■□□□□ 0.61
SNRNP200O75643 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
SNRNP200O75643 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.87■□□□□ 0.61
SNRNP200O75643 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP200O75643 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP200O75643 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP200O75643 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.87■□□□□ 0.61
SNRNP200O75643 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SNRNP200O75643 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.86■□□□□ 0.61
SNRNP200O75643 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.86■□□□□ 0.61
SNRNP200O75643 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SNRNP200O75643 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP200O75643 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SNRNP200O75643 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms