Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 MIR940-201ENST00000401276 94 ntBASIC8.85□□□□□ -0.99
USH2AO75445 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC8.85□□□□□ -0.99
USH2AO75445 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 ABR-217ENST00000572441 563 ntTSL 4 BASIC8.85□□□□□ -0.99
USH2AO75445 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC8.85□□□□□ -0.99
USH2AO75445 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
USH2AO75445 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
USH2AO75445 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
USH2AO75445 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC8.85□□□□□ -0.99
USH2AO75445 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC8.85□□□□□ -0.99
USH2AO75445 TSPY17P-201ENST00000450329 467 ntBASIC8.85□□□□□ -0.99
USH2AO75445 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC8.85□□□□□ -0.99
USH2AO75445 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
USH2AO75445 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC8.85□□□□□ -0.99
USH2AO75445 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
USH2AO75445 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
USH2AO75445 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
USH2AO75445 VPS51-217ENST00000639871 243 ntTSL 5 BASIC8.85□□□□□ -0.99
USH2AO75445 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC8.85□□□□□ -0.99
USH2AO75445 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC8.85□□□□□ -0.99
USH2AO75445 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC8.85□□□□□ -0.99
USH2AO75445 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 Telomerase-vert.1-201ENST00000363312 438 ntBASIC8.85□□□□□ -0.99
USH2AO75445 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC8.85□□□□□ -0.99
USH2AO75445 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
USH2AO75445 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC8.85□□□□□ -0.99
USH2AO75445 ZNF444P1-201ENST00000559497 298 ntBASIC8.85□□□□□ -0.99
USH2AO75445 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC8.85□□□□□ -0.99
USH2AO75445 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
USH2AO75445 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC8.84□□□□□ -0.99
USH2AO75445 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
USH2AO75445 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC8.84□□□□□ -0.99
USH2AO75445 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC8.84□□□□□ -0.99
USH2AO75445 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
USH2AO75445 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
USH2AO75445 FOSL1P1-201ENST00000511041 816 ntBASIC8.84□□□□□ -0.99
USH2AO75445 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
USH2AO75445 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
USH2AO75445 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC8.84□□□□□ -0.99
USH2AO75445 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC8.84□□□□□ -0.99
USH2AO75445 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC8.84□□□□□ -0.99
USH2AO75445 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC8.84□□□□□ -0.99
USH2AO75445 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC8.84□□□□□ -0.99
USH2AO75445 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
USH2AO75445 NEK4P2-201ENST00000580004 1012 ntBASIC8.84□□□□□ -0.99
USH2AO75445 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 AL691403.2-201ENST00000618460 490 ntBASIC8.84□□□□□ -0.99
USH2AO75445 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC8.84□□□□□ -0.99
USH2AO75445 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 AKR1C7P-201ENST00000305623 895 ntBASIC8.84□□□□□ -0.99
USH2AO75445 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 STK25-204ENST00000405585 1643 ntTSL 2 BASIC8.84□□□□□ -0.99
USH2AO75445 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 URGCP-206ENST00000446958 365 ntTSL 2 BASIC8.84□□□□□ -0.99
USH2AO75445 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC8.84□□□□□ -0.99
USH2AO75445 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC8.84□□□□□ -0.99
USH2AO75445 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC8.84□□□□□ -0.99
USH2AO75445 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC8.84□□□□□ -0.99
USH2AO75445 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC8.84□□□□□ -0.99
USH2AO75445 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC8.84□□□□□ -0.99
USH2AO75445 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
USH2AO75445 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC8.83□□□□□ -1
USH2AO75445 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC8.83□□□□□ -1
USH2AO75445 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
USH2AO75445 AC244107.1-201ENST00000442033 332 ntBASIC8.83□□□□□ -1
USH2AO75445 GXYLT1P6-201ENST00000456472 1187 ntBASIC8.83□□□□□ -1
USH2AO75445 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
USH2AO75445 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC8.83□□□□□ -1
USH2AO75445 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC8.83□□□□□ -1
USH2AO75445 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC8.83□□□□□ -1
USH2AO75445 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms