Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN3O60637 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.34■□□□□ 0.85
TSPAN3O60637 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
TSPAN3O60637 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.34■□□□□ 0.85
TSPAN3O60637 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN3O60637 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TSPAN3O60637 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN3O60637 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN3O60637 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
TSPAN3O60637 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.33■□□□□ 0.85
TSPAN3O60637 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.33■□□□□ 0.85
TSPAN3O60637 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.33■□□□□ 0.85
TSPAN3O60637 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.33■□□□□ 0.85
TSPAN3O60637 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TSPAN3O60637 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TSPAN3O60637 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.33■□□□□ 0.85
TSPAN3O60637 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TSPAN3O60637 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.33■□□□□ 0.85
TSPAN3O60637 AC113410.3-201ENST00000623366 203 ntBASIC20.33■□□□□ 0.85
TSPAN3O60637 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.33■□□□□ 0.85
TSPAN3O60637 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TSPAN3O60637 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TSPAN3O60637 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
TSPAN3O60637 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
TSPAN3O60637 AL135905.2-201ENST00000584934 1404 ntBASIC20.33■□□□□ 0.84
TSPAN3O60637 AL162377.1-201ENST00000618844 1793 ntBASIC20.33■□□□□ 0.84
TSPAN3O60637 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TSPAN3O60637 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TSPAN3O60637 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TSPAN3O60637 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.33■□□□□ 0.84
TSPAN3O60637 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN3O60637 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN3O60637 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN3O60637 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN3O60637 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN3O60637 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN3O60637 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN3O60637 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN3O60637 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
TSPAN3O60637 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.32■□□□□ 0.84
TSPAN3O60637 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN3O60637 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN3O60637 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.32■□□□□ 0.84
TSPAN3O60637 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.32■□□□□ 0.84
TSPAN3O60637 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.32■□□□□ 0.84
TSPAN3O60637 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.32■□□□□ 0.84
TSPAN3O60637 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.32■□□□□ 0.84
TSPAN3O60637 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN3O60637 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TSPAN3O60637 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.32■□□□□ 0.84
TSPAN3O60637 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN3O60637 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
TSPAN3O60637 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN3O60637 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.31■□□□□ 0.84
TSPAN3O60637 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TSPAN3O60637 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TSPAN3O60637 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN3O60637 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TSPAN3O60637 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN3O60637 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TSPAN3O60637 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN3O60637 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TSPAN3O60637 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN3O60637 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN3O60637 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.31■□□□□ 0.84
TSPAN3O60637 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.31■□□□□ 0.84
TSPAN3O60637 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN3O60637 AF186192.3-201ENST00000583427 947 ntBASIC20.31■□□□□ 0.84
TSPAN3O60637 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.31■□□□□ 0.84
TSPAN3O60637 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.31■□□□□ 0.84
TSPAN3O60637 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TSPAN3O60637 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.31■□□□□ 0.84
TSPAN3O60637 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.31■□□□□ 0.84
TSPAN3O60637 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN3O60637 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN3O60637 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
TSPAN3O60637 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN3O60637 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN3O60637 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN3O60637 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN3O60637 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN3O60637 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN3O60637 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN3O60637 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.3■□□□□ 0.84
TSPAN3O60637 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN3O60637 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.3■□□□□ 0.84
TSPAN3O60637 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.3■□□□□ 0.84
TSPAN3O60637 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN3O60637 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN3O60637 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.3■□□□□ 0.84
TSPAN3O60637 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TSPAN3O60637 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.3■□□□□ 0.84
TSPAN3O60637 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.3■□□□□ 0.84
TSPAN3O60637 AP001412.1-201ENST00000608405 714 ntBASIC20.3■□□□□ 0.84
TSPAN3O60637 AL691432.2-201ENST00000607222 2038 ntBASIC20.3■□□□□ 0.84
TSPAN3O60637 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.3■□□□□ 0.84
TSPAN3O60637 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN3O60637 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TSPAN3O60637 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.3■□□□□ 0.84
TSPAN3O60637 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms