Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.42■■□□□ 1.18
CCNT1O60563 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.42■■□□□ 1.18
CCNT1O60563 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.42■■□□□ 1.18
CCNT1O60563 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.41■■□□□ 1.18
CCNT1O60563 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CCNT1O60563 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCNT1O60563 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCNT1O60563 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCNT1O60563 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.41■■□□□ 1.18
CCNT1O60563 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCNT1O60563 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.41■■□□□ 1.18
CCNT1O60563 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.41■■□□□ 1.18
CCNT1O60563 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.41■■□□□ 1.18
CCNT1O60563 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCNT1O60563 MTDHP1-201ENST00000605323 784 ntBASIC22.41■■□□□ 1.18
CCNT1O60563 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCNT1O60563 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.41■■□□□ 1.18
CCNT1O60563 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CCNT1O60563 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CCNT1O60563 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCNT1O60563 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.41■■□□□ 1.18
CCNT1O60563 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
CCNT1O60563 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
CCNT1O60563 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCNT1O60563 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCNT1O60563 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCNT1O60563 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCNT1O60563 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCNT1O60563 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCNT1O60563 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.4■■□□□ 1.18
CCNT1O60563 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCNT1O60563 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CCNT1O60563 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCNT1O60563 ABHD17AP1-201ENST00000358206 933 ntBASIC22.4■■□□□ 1.18
CCNT1O60563 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCNT1O60563 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCNT1O60563 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCNT1O60563 ITM2C-210ENST00000620962 501 ntBASIC22.4■■□□□ 1.18
CCNT1O60563 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CCNT1O60563 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCNT1O60563 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
CCNT1O60563 SLC25A24-204ENST00000569674 2357 ntBASIC22.4■■□□□ 1.18
CCNT1O60563 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCNT1O60563 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCNT1O60563 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCNT1O60563 KRT18P29-201ENST00000397031 1267 ntBASIC22.39■■□□□ 1.17
CCNT1O60563 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCNT1O60563 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.39■■□□□ 1.17
CCNT1O60563 PRKY-204ENST00000533551 1019 ntBASIC22.39■■□□□ 1.17
CCNT1O60563 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.39■■□□□ 1.17
CCNT1O60563 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCNT1O60563 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CCNT1O60563 AC125437.2-201ENST00000625180 2167 ntBASIC22.39■■□□□ 1.17
CCNT1O60563 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCNT1O60563 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCNT1O60563 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.39■■□□□ 1.17
CCNT1O60563 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.39■■□□□ 1.17
CCNT1O60563 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.38■■□□□ 1.17
CCNT1O60563 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.38■■□□□ 1.17
CCNT1O60563 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNT1O60563 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNT1O60563 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.38■■□□□ 1.17
CCNT1O60563 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCNT1O60563 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.38■■□□□ 1.17
CCNT1O60563 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNT1O60563 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNT1O60563 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.38■■□□□ 1.17
CCNT1O60563 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.38■■□□□ 1.17
CCNT1O60563 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.38■■□□□ 1.17
CCNT1O60563 AL023875.1-201ENST00000640777 796 ntBASIC22.38■■□□□ 1.17
CCNT1O60563 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CCNT1O60563 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.38■■□□□ 1.17
CCNT1O60563 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.38■■□□□ 1.17
CCNT1O60563 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCNT1O60563 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.38■■□□□ 1.17
CCNT1O60563 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CCNT1O60563 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNT1O60563 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CCNT1O60563 AP006587.1-201ENST00000534129 1502 ntBASIC22.37■■□□□ 1.17
CCNT1O60563 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCNT1O60563 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCNT1O60563 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.37■■□□□ 1.17
CCNT1O60563 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.37■■□□□ 1.17
CCNT1O60563 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.37■■□□□ 1.17
CCNT1O60563 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.37■■□□□ 1.17
CCNT1O60563 RN7SL471P-201ENST00000580476 299 ntBASIC22.37■■□□□ 1.17
CCNT1O60563 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.37■■□□□ 1.17
CCNT1O60563 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.37■■□□□ 1.17
CCNT1O60563 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCNT1O60563 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.37■■□□□ 1.17
CCNT1O60563 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
CCNT1O60563 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.37■■□□□ 1.17
CCNT1O60563 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCNT1O60563 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms