Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.4■□□□□ 0.38
GMDSO60547 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.4■□□□□ 0.38
GMDSO60547 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
GMDSO60547 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 AC087633.2-202ENST00000565166 1439 ntBASIC17.4■□□□□ 0.38
GMDSO60547 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.4■□□□□ 0.38
GMDSO60547 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
GMDSO60547 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GMDSO60547 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.4■□□□□ 0.38
GMDSO60547 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 MCRIP2P1-201ENST00000394346 511 ntBASIC17.4■□□□□ 0.38
GMDSO60547 AL512625.2-201ENST00000417533 625 ntBASIC17.4■□□□□ 0.38
GMDSO60547 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
GMDSO60547 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GMDSO60547 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.4■□□□□ 0.38
GMDSO60547 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GMDSO60547 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
GMDSO60547 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
GMDSO60547 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GMDSO60547 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GMDSO60547 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.39■□□□□ 0.37
GMDSO60547 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GMDSO60547 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GMDSO60547 CYP21A1P-202ENST00000354927 1481 ntBASIC17.39■□□□□ 0.37
GMDSO60547 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.39■□□□□ 0.37
GMDSO60547 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.39■□□□□ 0.37
GMDSO60547 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GMDSO60547 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.39■□□□□ 0.37
GMDSO60547 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
GMDSO60547 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
GMDSO60547 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.39■□□□□ 0.37
GMDSO60547 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.39■□□□□ 0.37
GMDSO60547 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.39■□□□□ 0.37
GMDSO60547 AC133552.2-202ENST00000575694 574 ntBASIC17.39■□□□□ 0.37
GMDSO60547 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.39■□□□□ 0.37
GMDSO60547 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GMDSO60547 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GMDSO60547 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.39■□□□□ 0.37
GMDSO60547 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
GMDSO60547 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
GMDSO60547 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GMDSO60547 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GMDSO60547 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GMDSO60547 DPP3P2-201ENST00000416030 1696 ntBASIC17.39■□□□□ 0.37
GMDSO60547 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.39■□□□□ 0.37
GMDSO60547 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.39■□□□□ 0.37
GMDSO60547 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GMDSO60547 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.39■□□□□ 0.37
GMDSO60547 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
GMDSO60547 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GMDSO60547 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.38■□□□□ 0.37
GMDSO60547 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.38■□□□□ 0.37
GMDSO60547 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.38■□□□□ 0.37
GMDSO60547 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.38■□□□□ 0.37
GMDSO60547 RAP2CP1-201ENST00000605103 478 ntBASIC17.38■□□□□ 0.37
GMDSO60547 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.38■□□□□ 0.37
GMDSO60547 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.38■□□□□ 0.37
GMDSO60547 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GMDSO60547 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GMDSO60547 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GMDSO60547 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GMDSO60547 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GMDSO60547 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GMDSO60547 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.37■□□□□ 0.37
GMDSO60547 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.37■□□□□ 0.37
GMDSO60547 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.37■□□□□ 0.37
GMDSO60547 AL356652.1-201ENST00000615962 565 ntBASIC17.37■□□□□ 0.37
GMDSO60547 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GMDSO60547 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
GMDSO60547 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GMDSO60547 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GMDSO60547 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
GMDSO60547 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms