Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.37■□□□□ 0.53
PRKNO60260 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.37■□□□□ 0.53
PRKNO60260 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.37■□□□□ 0.53
PRKNO60260 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.37■□□□□ 0.53
PRKNO60260 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PRKNO60260 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRKNO60260 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRKNO60260 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.37■□□□□ 0.53
PRKNO60260 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.37■□□□□ 0.53
PRKNO60260 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRKNO60260 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRKNO60260 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.37■□□□□ 0.53
PRKNO60260 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRKNO60260 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.37■□□□□ 0.53
PRKNO60260 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRKNO60260 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRKNO60260 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRKNO60260 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRKNO60260 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PRKNO60260 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRKNO60260 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.36■□□□□ 0.53
PRKNO60260 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
PRKNO60260 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRKNO60260 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.36■□□□□ 0.53
PRKNO60260 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.36■□□□□ 0.53
PRKNO60260 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.36■□□□□ 0.53
PRKNO60260 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRKNO60260 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.36■□□□□ 0.53
PRKNO60260 AC133681.1-201ENST00000465482 601 ntBASIC18.36■□□□□ 0.53
PRKNO60260 AC093827.2-201ENST00000512654 315 ntBASIC18.36■□□□□ 0.53
PRKNO60260 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.36■□□□□ 0.53
PRKNO60260 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRKNO60260 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.36■□□□□ 0.53
PRKNO60260 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.36■□□□□ 0.53
PRKNO60260 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
PRKNO60260 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRKNO60260 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRKNO60260 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.36■□□□□ 0.53
PRKNO60260 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PRKNO60260 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.35■□□□□ 0.53
PRKNO60260 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PRKNO60260 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.35■□□□□ 0.53
PRKNO60260 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.35■□□□□ 0.53
PRKNO60260 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PRKNO60260 UBE2SP1-201ENST00000450587 669 ntBASIC18.35■□□□□ 0.53
PRKNO60260 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.35■□□□□ 0.53
PRKNO60260 PRKY-204ENST00000533551 1019 ntBASIC18.35■□□□□ 0.53
PRKNO60260 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.35■□□□□ 0.53
PRKNO60260 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.35■□□□□ 0.53
PRKNO60260 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.35■□□□□ 0.53
PRKNO60260 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.35■□□□□ 0.53
PRKNO60260 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.35■□□□□ 0.53
PRKNO60260 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PRKNO60260 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.35■□□□□ 0.53
PRKNO60260 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.35■□□□□ 0.53
PRKNO60260 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PRKNO60260 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.35■□□□□ 0.53
PRKNO60260 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PRKNO60260 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.35■□□□□ 0.53
PRKNO60260 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRKNO60260 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.34■□□□□ 0.53
PRKNO60260 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRKNO60260 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRKNO60260 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.34■□□□□ 0.53
PRKNO60260 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PRKNO60260 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PRKNO60260 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRKNO60260 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRKNO60260 AC018553.1-201ENST00000616682 1458 ntBASIC18.34■□□□□ 0.53
PRKNO60260 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRKNO60260 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRKNO60260 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRKNO60260 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.34■□□□□ 0.53
PRKNO60260 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRKNO60260 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRKNO60260 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.34■□□□□ 0.53
PRKNO60260 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.34■□□□□ 0.53
PRKNO60260 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.34■□□□□ 0.53
PRKNO60260 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.34■□□□□ 0.53
PRKNO60260 AC110285.5-201ENST00000611501 352 ntBASIC18.34■□□□□ 0.53
PRKNO60260 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRKNO60260 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRKNO60260 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
PRKNO60260 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRKNO60260 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms