Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
VEGFDO43915 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
VEGFDO43915 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VEGFDO43915 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VEGFDO43915 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
VEGFDO43915 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
VEGFDO43915 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
VEGFDO43915 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VEGFDO43915 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.38■□□□□ 0.69
VEGFDO43915 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VEGFDO43915 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VEGFDO43915 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.38■□□□□ 0.69
VEGFDO43915 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VEGFDO43915 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VEGFDO43915 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.38■□□□□ 0.69
VEGFDO43915 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.38■□□□□ 0.69
VEGFDO43915 AL135905.2-201ENST00000584934 1404 ntBASIC19.38■□□□□ 0.69
VEGFDO43915 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.38■□□□□ 0.69
VEGFDO43915 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.38■□□□□ 0.69
VEGFDO43915 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.38■□□□□ 0.69
VEGFDO43915 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
VEGFDO43915 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VEGFDO43915 AC066615.1-201ENST00000640911 628 ntBASIC19.38■□□□□ 0.69
VEGFDO43915 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VEGFDO43915 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.37■□□□□ 0.69
VEGFDO43915 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VEGFDO43915 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.37■□□□□ 0.69
VEGFDO43915 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VEGFDO43915 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VEGFDO43915 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VEGFDO43915 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
VEGFDO43915 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
VEGFDO43915 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.37■□□□□ 0.69
VEGFDO43915 AC008550.1-201ENST00000511500 884 ntBASIC19.37■□□□□ 0.69
VEGFDO43915 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.37■□□□□ 0.69
VEGFDO43915 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.37■□□□□ 0.69
VEGFDO43915 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.37■□□□□ 0.69
VEGFDO43915 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VEGFDO43915 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VEGFDO43915 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VEGFDO43915 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.37■□□□□ 0.69
VEGFDO43915 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VEGFDO43915 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.36■□□□□ 0.69
VEGFDO43915 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
VEGFDO43915 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VEGFDO43915 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VEGFDO43915 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VEGFDO43915 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VEGFDO43915 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VEGFDO43915 MIR718-201ENST00000390190 70 ntBASIC19.36■□□□□ 0.69
VEGFDO43915 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VEGFDO43915 TUBB8P6-201ENST00000436895 1288 ntBASIC19.36■□□□□ 0.69
VEGFDO43915 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.36■□□□□ 0.69
VEGFDO43915 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.36■□□□□ 0.69
VEGFDO43915 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VEGFDO43915 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.36■□□□□ 0.69
VEGFDO43915 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.36■□□□□ 0.69
VEGFDO43915 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VEGFDO43915 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VEGFDO43915 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VEGFDO43915 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VEGFDO43915 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
VEGFDO43915 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VEGFDO43915 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
VEGFDO43915 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.35■□□□□ 0.69
VEGFDO43915 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.35■□□□□ 0.69
VEGFDO43915 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VEGFDO43915 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
VEGFDO43915 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VEGFDO43915 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.35■□□□□ 0.69
VEGFDO43915 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VEGFDO43915 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VEGFDO43915 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
VEGFDO43915 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VEGFDO43915 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
VEGFDO43915 AL353807.1-201ENST00000427475 662 ntBASIC19.35■□□□□ 0.69
VEGFDO43915 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.35■□□□□ 0.69
VEGFDO43915 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.35■□□□□ 0.69
VEGFDO43915 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VEGFDO43915 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VEGFDO43915 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VEGFDO43915 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.35■□□□□ 0.69
VEGFDO43915 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VEGFDO43915 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VEGFDO43915 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms