Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RRP8O43159 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RRP8O43159 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RRP8O43159 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RRP8O43159 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RRP8O43159 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RRP8O43159 INGX-201ENST00000359239 846 ntBASIC18.57■□□□□ 0.56
RRP8O43159 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.57■□□□□ 0.56
RRP8O43159 HOMER2P1-201ENST00000455653 964 ntBASIC18.57■□□□□ 0.56
RRP8O43159 AC011506.1-201ENST00000474329 610 ntBASIC18.57■□□□□ 0.56
RRP8O43159 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RRP8O43159 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.57■□□□□ 0.56
RRP8O43159 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.57■□□□□ 0.56
RRP8O43159 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RRP8O43159 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RRP8O43159 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.57■□□□□ 0.56
RRP8O43159 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.56■□□□□ 0.56
RRP8O43159 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RRP8O43159 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RRP8O43159 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RRP8O43159 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RRP8O43159 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.56■□□□□ 0.56
RRP8O43159 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.56■□□□□ 0.56
RRP8O43159 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RRP8O43159 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RRP8O43159 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RRP8O43159 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.56■□□□□ 0.56
RRP8O43159 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.56■□□□□ 0.56
RRP8O43159 FAM86EP-206ENST00000510506 987 ntBASIC18.56■□□□□ 0.56
RRP8O43159 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.56■□□□□ 0.56
RRP8O43159 AL512604.3-201ENST00000569583 964 ntBASIC18.56■□□□□ 0.56
RRP8O43159 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.56■□□□□ 0.56
RRP8O43159 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RRP8O43159 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RRP8O43159 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RRP8O43159 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RRP8O43159 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RRP8O43159 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RRP8O43159 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RRP8O43159 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RRP8O43159 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.55■□□□□ 0.56
RRP8O43159 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.55■□□□□ 0.56
RRP8O43159 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RRP8O43159 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RRP8O43159 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RRP8O43159 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RRP8O43159 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RRP8O43159 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RRP8O43159 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.55■□□□□ 0.56
RRP8O43159 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RRP8O43159 KRT8P20-201ENST00000423953 1409 ntBASIC18.55■□□□□ 0.56
RRP8O43159 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RRP8O43159 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RRP8O43159 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RRP8O43159 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.55■□□□□ 0.56
RRP8O43159 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RRP8O43159 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.55■□□□□ 0.56
RRP8O43159 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RRP8O43159 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RRP8O43159 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RRP8O43159 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.54■□□□□ 0.56
RRP8O43159 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.54■□□□□ 0.56
RRP8O43159 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RRP8O43159 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 SLC25A1P2-201ENST00000430693 912 ntBASIC18.54■□□□□ 0.56
RRP8O43159 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.54■□□□□ 0.56
RRP8O43159 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
RRP8O43159 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.54■□□□□ 0.56
RRP8O43159 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.54■□□□□ 0.56
RRP8O43159 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RRP8O43159 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RRP8O43159 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.54■□□□□ 0.56
RRP8O43159 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RRP8O43159 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RRP8O43159 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RRP8O43159 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RRP8O43159 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.53■□□□□ 0.56
RRP8O43159 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
RRP8O43159 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RRP8O43159 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RRP8O43159 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RRP8O43159 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.53■□□□□ 0.56
RRP8O43159 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.53■□□□□ 0.56
RRP8O43159 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RRP8O43159 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms