Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF113AO15541 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF113AO15541 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.72■■□□□ 1.39
RNF113AO15541 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.72■■□□□ 1.39
RNF113AO15541 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF113AO15541 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF113AO15541 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF113AO15541 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF113AO15541 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.71■■□□□ 1.39
RNF113AO15541 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
RNF113AO15541 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF113AO15541 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF113AO15541 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF113AO15541 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.71■■□□□ 1.39
RNF113AO15541 YBX1P10-201ENST00000444752 975 ntBASIC23.71■■□□□ 1.39
RNF113AO15541 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
RNF113AO15541 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.71■■□□□ 1.39
RNF113AO15541 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF113AO15541 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.71■■□□□ 1.39
RNF113AO15541 FAM197Y4-202ENST00000622692 608 ntBASIC23.71■■□□□ 1.39
RNF113AO15541 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.7■■□□□ 1.39
RNF113AO15541 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RNF113AO15541 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RNF113AO15541 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF113AO15541 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.7■■□□□ 1.38
RNF113AO15541 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
RNF113AO15541 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF113AO15541 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF113AO15541 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.7■■□□□ 1.38
RNF113AO15541 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.7■■□□□ 1.38
RNF113AO15541 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.7■■□□□ 1.38
RNF113AO15541 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.7■■□□□ 1.38
RNF113AO15541 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.7■■□□□ 1.38
RNF113AO15541 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF113AO15541 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
RNF113AO15541 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
RNF113AO15541 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF113AO15541 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF113AO15541 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF113AO15541 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.69■■□□□ 1.38
RNF113AO15541 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF113AO15541 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
RNF113AO15541 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF113AO15541 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF113AO15541 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF113AO15541 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF113AO15541 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.69■■□□□ 1.38
RNF113AO15541 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.69■■□□□ 1.38
RNF113AO15541 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.69■■□□□ 1.38
RNF113AO15541 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF113AO15541 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF113AO15541 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF113AO15541 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.69■■□□□ 1.38
RNF113AO15541 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
RNF113AO15541 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF113AO15541 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF113AO15541 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF113AO15541 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
RNF113AO15541 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF113AO15541 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF113AO15541 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF113AO15541 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF113AO15541 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF113AO15541 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RNF113AO15541 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RNF113AO15541 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF113AO15541 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF113AO15541 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF113AO15541 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF113AO15541 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF113AO15541 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF113AO15541 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
RNF113AO15541 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.68■■□□□ 1.38
RNF113AO15541 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF113AO15541 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.68■■□□□ 1.38
RNF113AO15541 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF113AO15541 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF113AO15541 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF113AO15541 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
RNF113AO15541 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF113AO15541 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF113AO15541 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF113AO15541 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF113AO15541 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF113AO15541 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
RNF113AO15541 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF113AO15541 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF113AO15541 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
RNF113AO15541 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF113AO15541 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF113AO15541 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF113AO15541 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF113AO15541 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF113AO15541 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF113AO15541 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
RNF113AO15541 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
RNF113AO15541 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF113AO15541 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF113AO15541 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF113AO15541 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms