Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.7■□□□□ 0.58
UPK1AO00322 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.7■□□□□ 0.58
UPK1AO00322 AL031963.3-201ENST00000606441 850 ntBASIC18.7■□□□□ 0.58
UPK1AO00322 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
UPK1AO00322 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.7■□□□□ 0.58
UPK1AO00322 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
UPK1AO00322 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
UPK1AO00322 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.7■□□□□ 0.58
UPK1AO00322 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
UPK1AO00322 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
UPK1AO00322 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1AO00322 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1AO00322 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1AO00322 KRT8P20-201ENST00000423953 1409 ntBASIC18.69■□□□□ 0.58
UPK1AO00322 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1AO00322 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
UPK1AO00322 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1AO00322 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
UPK1AO00322 SLC29A4P1-201ENST00000398760 971 ntBASIC18.69■□□□□ 0.58
UPK1AO00322 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.69■□□□□ 0.58
UPK1AO00322 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.69■□□□□ 0.58
UPK1AO00322 AC090192.1-201ENST00000517740 490 ntBASIC18.69■□□□□ 0.58
UPK1AO00322 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.69■□□□□ 0.58
UPK1AO00322 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
UPK1AO00322 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.69■□□□□ 0.58
UPK1AO00322 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1AO00322 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1AO00322 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
UPK1AO00322 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.69■□□□□ 0.58
UPK1AO00322 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1AO00322 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1AO00322 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.69■□□□□ 0.58
UPK1AO00322 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1AO00322 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
UPK1AO00322 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.68■□□□□ 0.58
UPK1AO00322 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UPK1AO00322 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.68■□□□□ 0.58
UPK1AO00322 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
UPK1AO00322 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
UPK1AO00322 NEFHP1-201ENST00000412845 2629 ntBASIC18.68■□□□□ 0.58
UPK1AO00322 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UPK1AO00322 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.68■□□□□ 0.58
UPK1AO00322 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.68■□□□□ 0.58
UPK1AO00322 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.68■□□□□ 0.58
UPK1AO00322 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.68■□□□□ 0.58
UPK1AO00322 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.68■□□□□ 0.58
UPK1AO00322 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.68■□□□□ 0.58
UPK1AO00322 AC092118.2-201ENST00000613495 667 ntBASIC18.68■□□□□ 0.58
UPK1AO00322 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.68■□□□□ 0.58
UPK1AO00322 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UPK1AO00322 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1AO00322 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UPK1AO00322 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.67■□□□□ 0.58
UPK1AO00322 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
UPK1AO00322 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1AO00322 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1AO00322 AC023632.3-201ENST00000521633 145 ntBASIC18.67■□□□□ 0.58
UPK1AO00322 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1AO00322 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.67■□□□□ 0.58
UPK1AO00322 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1AO00322 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.67■□□□□ 0.58
UPK1AO00322 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UPK1AO00322 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1AO00322 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1AO00322 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
UPK1AO00322 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UPK1AO00322 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1AO00322 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UPK1AO00322 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.67■□□□□ 0.58
UPK1AO00322 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.67■□□□□ 0.58
UPK1AO00322 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.66■□□□□ 0.58
UPK1AO00322 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1AO00322 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms