Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP3B1O00203 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.93■□□□□ 0.78
AP3B1O00203 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.93■□□□□ 0.78
AP3B1O00203 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
AP3B1O00203 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.93■□□□□ 0.78
AP3B1O00203 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.93■□□□□ 0.78
AP3B1O00203 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.93■□□□□ 0.78
AP3B1O00203 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3B1O00203 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
AP3B1O00203 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP3B1O00203 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.93■□□□□ 0.78
AP3B1O00203 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP3B1O00203 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3B1O00203 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3B1O00203 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3B1O00203 AC018553.1-201ENST00000616682 1458 ntBASIC19.92■□□□□ 0.78
AP3B1O00203 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3B1O00203 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.92■□□□□ 0.78
AP3B1O00203 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.92■□□□□ 0.78
AP3B1O00203 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.92■□□□□ 0.78
AP3B1O00203 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3B1O00203 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3B1O00203 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3B1O00203 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP3B1O00203 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP3B1O00203 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP3B1O00203 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3B1O00203 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.92■□□□□ 0.78
AP3B1O00203 MIR4758-201ENST00000577688 71 ntBASIC19.92■□□□□ 0.78
AP3B1O00203 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
AP3B1O00203 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3B1O00203 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
AP3B1O00203 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
AP3B1O00203 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.92■□□□□ 0.78
AP3B1O00203 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
AP3B1O00203 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3B1O00203 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.92■□□□□ 0.78
AP3B1O00203 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.92■□□□□ 0.78
AP3B1O00203 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP3B1O00203 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
AP3B1O00203 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3B1O00203 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
AP3B1O00203 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3B1O00203 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3B1O00203 AC116562.4-201ENST00000641316 2276 ntBASIC19.91■□□□□ 0.78
AP3B1O00203 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3B1O00203 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.91■□□□□ 0.78
AP3B1O00203 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.91■□□□□ 0.78
AP3B1O00203 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3B1O00203 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.91■□□□□ 0.78
AP3B1O00203 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
AP3B1O00203 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.91■□□□□ 0.78
AP3B1O00203 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3B1O00203 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3B1O00203 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3B1O00203 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
AP3B1O00203 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.91■□□□□ 0.78
AP3B1O00203 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
AP3B1O00203 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
AP3B1O00203 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
AP3B1O00203 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3B1O00203 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP3B1O00203 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.9■□□□□ 0.78
AP3B1O00203 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.9■□□□□ 0.78
AP3B1O00203 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP3B1O00203 DUSP5P2-201ENST00000426873 1033 ntBASIC19.9■□□□□ 0.78
AP3B1O00203 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.9■□□□□ 0.78
AP3B1O00203 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.9■□□□□ 0.78
AP3B1O00203 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.9■□□□□ 0.78
AP3B1O00203 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
AP3B1O00203 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP3B1O00203 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
AP3B1O00203 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
AP3B1O00203 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
AP3B1O00203 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
AP3B1O00203 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP3B1O00203 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
AP3B1O00203 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP3B1O00203 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.89■□□□□ 0.77
AP3B1O00203 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
AP3B1O00203 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP3B1O00203 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
AP3B1O00203 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.89■□□□□ 0.77
AP3B1O00203 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.89■□□□□ 0.77
AP3B1O00203 NCF1B-203ENST00000435988 1254 ntBASIC19.89■□□□□ 0.77
AP3B1O00203 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.89■□□□□ 0.77
AP3B1O00203 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.89■□□□□ 0.77
AP3B1O00203 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.89■□□□□ 0.77
AP3B1O00203 AC091874.3-201ENST00000512672 1195 ntBASIC19.89■□□□□ 0.77
AP3B1O00203 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
AP3B1O00203 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
AP3B1O00203 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
AP3B1O00203 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.89■□□□□ 0.77
AP3B1O00203 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP3B1O00203 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AP3B1O00203 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.88■□□□□ 0.77
AP3B1O00203 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP3B1O00203 AC005332.7-201ENST00000614046 2005 ntBASIC19.88■□□□□ 0.77
AP3B1O00203 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.88■□□□□ 0.77
AP3B1O00203 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms