Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC093484.2-201ENST00000580996 2166 ntBASIC17.49■□□□□ 0.39
NPIPB4C9JG80 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 AC005332.7-201ENST00000614046 2005 ntBASIC17.48■□□□□ 0.39
NPIPB4C9JG80 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 AC116562.4-201ENST00000641316 2276 ntBASIC17.48■□□□□ 0.39
NPIPB4C9JG80 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 AL121829.2-201ENST00000620908 328 ntBASIC17.48■□□□□ 0.39
NPIPB4C9JG80 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPB4C9JG80 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 YBX1P10-201ENST00000444752 975 ntBASIC17.47■□□□□ 0.39
NPIPB4C9JG80 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPB4C9JG80 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPB4C9JG80 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.46■□□□□ 0.38
NPIPB4C9JG80 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 AC007952.6-201ENST00000573168 2673 ntBASIC17.45■□□□□ 0.38
NPIPB4C9JG80 AC003957.1-201ENST00000625108 2673 ntBASIC17.45■□□□□ 0.38
NPIPB4C9JG80 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 Z82202.1-201ENST00000623446 1880 ntBASIC17.45■□□□□ 0.38
NPIPB4C9JG80 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPB4C9JG80 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms