Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC26.27■■□□□ 1.8
RTL1A6NKG5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RTL1A6NKG5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC26.27■■□□□ 1.8
RTL1A6NKG5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC26.27■■□□□ 1.8
RTL1A6NKG5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
RTL1A6NKG5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RTL1A6NKG5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
RTL1A6NKG5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
RTL1A6NKG5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTL1A6NKG5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTL1A6NKG5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC26.26■■□□□ 1.79
RTL1A6NKG5 AC010203.1-204ENST00000548782 407 ntBASIC26.26■■□□□ 1.79
RTL1A6NKG5 FAM87A-204ENST00000613235 858 ntBASIC26.26■■□□□ 1.79
RTL1A6NKG5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTL1A6NKG5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
RTL1A6NKG5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC26.26■■□□□ 1.79
RTL1A6NKG5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTL1A6NKG5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTL1A6NKG5 SMG8-203ENST00000578922 2178 ntBASIC26.25■■□□□ 1.79
RTL1A6NKG5 AL137060.1-201ENST00000618151 2648 ntBASIC26.25■■□□□ 1.79
RTL1A6NKG5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RTL1A6NKG5 AC097488.1-201ENST00000507834 756 ntBASIC26.25■■□□□ 1.79
RTL1A6NKG5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC26.25■■□□□ 1.79
RTL1A6NKG5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC26.25■■□□□ 1.79
RTL1A6NKG5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTL1A6NKG5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTL1A6NKG5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC26.25■■□□□ 1.79
RTL1A6NKG5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTL1A6NKG5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTL1A6NKG5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC26.25■■□□□ 1.79
RTL1A6NKG5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTL1A6NKG5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTL1A6NKG5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTL1A6NKG5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RTL1A6NKG5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTL1A6NKG5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC26.24■■□□□ 1.79
RTL1A6NKG5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC26.24■■□□□ 1.79
RTL1A6NKG5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTL1A6NKG5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTL1A6NKG5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTL1A6NKG5 Z85996.1-201ENST00000494644 937 ntBASIC26.24■■□□□ 1.79
RTL1A6NKG5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC26.24■■□□□ 1.79
RTL1A6NKG5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC26.24■■□□□ 1.79
RTL1A6NKG5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTL1A6NKG5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTL1A6NKG5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
RTL1A6NKG5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC26.24■■□□□ 1.79
RTL1A6NKG5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RTL1A6NKG5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC26.23■■□□□ 1.79
RTL1A6NKG5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTL1A6NKG5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTL1A6NKG5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC26.23■■□□□ 1.79
RTL1A6NKG5 AC011298.2-201ENST00000617989 482 ntBASIC26.23■■□□□ 1.79
RTL1A6NKG5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RTL1A6NKG5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RTL1A6NKG5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
RTL1A6NKG5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTL1A6NKG5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC26.22■■□□□ 1.79
RTL1A6NKG5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL1A6NKG5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL1A6NKG5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC26.22■■□□□ 1.79
RTL1A6NKG5 AC004951.3-201ENST00000418645 1148 ntBASIC26.22■■□□□ 1.79
RTL1A6NKG5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC26.22■■□□□ 1.79
RTL1A6NKG5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC26.22■■□□□ 1.79
RTL1A6NKG5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC26.22■■□□□ 1.79
RTL1A6NKG5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
RTL1A6NKG5 AC006011.2-201ENST00000621313 1158 ntBASIC26.22■■□□□ 1.79
RTL1A6NKG5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL1A6NKG5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC26.22■■□□□ 1.79
RTL1A6NKG5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL1A6NKG5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL1A6NKG5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC26.22■■□□□ 1.79
RTL1A6NKG5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC26.22■■□□□ 1.79
RTL1A6NKG5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTL1A6NKG5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC26.22■■□□□ 1.79
RTL1A6NKG5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL1A6NKG5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL1A6NKG5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL1A6NKG5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL1A6NKG5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC26.22■■□□□ 1.79
RTL1A6NKG5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTL1A6NKG5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RTL1A6NKG5 CRYGFP-201ENST00000418459 633 ntBASIC26.21■■□□□ 1.79
RTL1A6NKG5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC26.21■■□□□ 1.79
RTL1A6NKG5 DUX4L26-201ENST00000489078 1255 ntBASIC26.21■■□□□ 1.79
RTL1A6NKG5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC26.21■■□□□ 1.79
RTL1A6NKG5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC26.21■■□□□ 1.79
RTL1A6NKG5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC26.21■■□□□ 1.79
RTL1A6NKG5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTL1A6NKG5 AP001271.2-201ENST00000624018 1556 ntBASIC26.21■■□□□ 1.79
RTL1A6NKG5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC26.21■■□□□ 1.79
RTL1A6NKG5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTL1A6NKG5 KRT8P8-201ENST00000434750 1448 ntBASIC26.21■■□□□ 1.79
RTL1A6NKG5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTL1A6NKG5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
RTL1A6NKG5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTL1A6NKG5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC26.21■■□□□ 1.79
RTL1A6NKG5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC26.21■■□□□ 1.79
RTL1A6NKG5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
RTL1A6NKG5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms