Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RCCD1A6NED2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RCCD1A6NED2 AL049812.1-201ENST00000432563 2267 ntBASIC20.98■□□□□ 0.95
RCCD1A6NED2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RCCD1A6NED2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RCCD1A6NED2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RCCD1A6NED2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RCCD1A6NED2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RCCD1A6NED2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RCCD1A6NED2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RCCD1A6NED2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RCCD1A6NED2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RCCD1A6NED2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RCCD1A6NED2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RCCD1A6NED2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.97■□□□□ 0.95
RCCD1A6NED2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RCCD1A6NED2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.97■□□□□ 0.95
RCCD1A6NED2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.97■□□□□ 0.95
RCCD1A6NED2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.97■□□□□ 0.95
RCCD1A6NED2 CYP2T3P-201ENST00000601990 817 ntBASIC20.97■□□□□ 0.95
RCCD1A6NED2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.97■□□□□ 0.95
RCCD1A6NED2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.97■□□□□ 0.95
RCCD1A6NED2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RCCD1A6NED2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RCCD1A6NED2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RCCD1A6NED2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RCCD1A6NED2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.97■□□□□ 0.95
RCCD1A6NED2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.97■□□□□ 0.95
RCCD1A6NED2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RCCD1A6NED2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.97■□□□□ 0.95
RCCD1A6NED2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
RCCD1A6NED2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RCCD1A6NED2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.96■□□□□ 0.95
RCCD1A6NED2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.96■□□□□ 0.95
RCCD1A6NED2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.96■□□□□ 0.95
RCCD1A6NED2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.96■□□□□ 0.95
RCCD1A6NED2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RCCD1A6NED2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RCCD1A6NED2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RCCD1A6NED2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RCCD1A6NED2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RCCD1A6NED2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RCCD1A6NED2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RCCD1A6NED2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.96■□□□□ 0.95
RCCD1A6NED2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RCCD1A6NED2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RCCD1A6NED2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.96■□□□□ 0.95
RCCD1A6NED2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RCCD1A6NED2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RCCD1A6NED2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RCCD1A6NED2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
RCCD1A6NED2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RCCD1A6NED2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RCCD1A6NED2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.96■□□□□ 0.95
RCCD1A6NED2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.95■□□□□ 0.95
RCCD1A6NED2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.95■□□□□ 0.94
RCCD1A6NED2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.95■□□□□ 0.94
RCCD1A6NED2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RCCD1A6NED2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RCCD1A6NED2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.94
RCCD1A6NED2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.95■□□□□ 0.94
RCCD1A6NED2 AC034268.1-201ENST00000441047 882 ntBASIC20.95■□□□□ 0.94
RCCD1A6NED2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RCCD1A6NED2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RCCD1A6NED2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RCCD1A6NED2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RCCD1A6NED2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RCCD1A6NED2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
RCCD1A6NED2 AL138781.2-201ENST00000617896 1843 ntBASIC20.94■□□□□ 0.94
RCCD1A6NED2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RCCD1A6NED2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RCCD1A6NED2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RCCD1A6NED2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.94■□□□□ 0.94
RCCD1A6NED2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.94■□□□□ 0.94
RCCD1A6NED2 MIR935-201ENST00000401179 91 ntBASIC20.94■□□□□ 0.94
RCCD1A6NED2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.94■□□□□ 0.94
RCCD1A6NED2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.94■□□□□ 0.94
RCCD1A6NED2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RCCD1A6NED2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.94■□□□□ 0.94
RCCD1A6NED2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RCCD1A6NED2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.94■□□□□ 0.94
RCCD1A6NED2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RCCD1A6NED2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RCCD1A6NED2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RCCD1A6NED2 AL161938.1-201ENST00000569833 2180 ntBASIC20.94■□□□□ 0.94
RCCD1A6NED2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.94■□□□□ 0.94
RCCD1A6NED2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RCCD1A6NED2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RCCD1A6NED2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RCCD1A6NED2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RCCD1A6NED2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RCCD1A6NED2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RCCD1A6NED2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RCCD1A6NED2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RCCD1A6NED2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RCCD1A6NED2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
RCCD1A6NED2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RCCD1A6NED2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RCCD1A6NED2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RCCD1A6NED2 KRT18P11-201ENST00000435214 1283 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms