Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 KRT8P9-201ENST00000558927 1449 ntBASIC17.37■□□□□ 0.37
MBD3L3A6NE82 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 AP005212.1-201ENST00000581547 1997 ntBASIC17.37■□□□□ 0.37
MBD3L3A6NE82 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 KRT18P21-201ENST00000515767 1272 ntBASIC17.36■□□□□ 0.37
MBD3L3A6NE82 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 NAPSB-206ENST00000562112 1266 ntBASIC17.36■□□□□ 0.37
MBD3L3A6NE82 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.36■□□□□ 0.37
MBD3L3A6NE82 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 HLA-A-209ENST00000638375 975 ntBASIC17.36■□□□□ 0.37
MBD3L3A6NE82 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.36■□□□□ 0.37
MBD3L3A6NE82 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 AL390955.1-201ENST00000428694 934 ntBASIC17.35■□□□□ 0.37
MBD3L3A6NE82 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 KRT8P8-201ENST00000434750 1448 ntBASIC17.35■□□□□ 0.37
MBD3L3A6NE82 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
MBD3L3A6NE82 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 RCN1P1-201ENST00000400413 996 ntBASIC17.34■□□□□ 0.37
MBD3L3A6NE82 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 AC011506.1-201ENST00000474329 610 ntBASIC17.34■□□□□ 0.37
MBD3L3A6NE82 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 AP005242.2-201ENST00000580065 1175 ntBASIC17.34■□□□□ 0.37
MBD3L3A6NE82 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MBD3L3A6NE82 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MBD3L3A6NE82 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.33■□□□□ 0.37
MBD3L3A6NE82 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MBD3L3A6NE82 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.33■□□□□ 0.37
MBD3L3A6NE82 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms