Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 MIR4758-201ENST00000577688 71 ntBASIC18.13■□□□□ 0.49
CDHR4A6H8M9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 AC092666.2-201ENST00000613287 246 ntBASIC18.13■□□□□ 0.49
CDHR4A6H8M9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 AC018553.1-201ENST00000616682 1458 ntBASIC18.13■□□□□ 0.49
CDHR4A6H8M9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CDHR4A6H8M9 AC116351.2-201ENST00000606540 1585 ntBASIC18.13■□□□□ 0.49
CDHR4A6H8M9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR4A6H8M9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 AC093484.2-201ENST00000580996 2166 ntBASIC18.11■□□□□ 0.49
CDHR4A6H8M9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 MYC-209ENST00000641252 345 ntBASIC18.11■□□□□ 0.49
CDHR4A6H8M9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDHR4A6H8M9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.1■□□□□ 0.49
CDHR4A6H8M9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CDHR4A6H8M9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms