Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 CYP2D8P-201ENST00000433633 1490 ntBASIC28.43■■■□□ 2.14
CCDC144AA2RUR9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC28.43■■■□□ 2.14
CCDC144AA2RUR9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC28.43■■■□□ 2.14
CCDC144AA2RUR9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC28.43■■■□□ 2.14
CCDC144AA2RUR9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC144AA2RUR9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC28.43■■■□□ 2.14
CCDC144AA2RUR9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC144AA2RUR9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC28.43■■■□□ 2.14
CCDC144AA2RUR9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC28.43■■■□□ 2.14
CCDC144AA2RUR9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC144AA2RUR9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC28.42■■■□□ 2.14
CCDC144AA2RUR9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC144AA2RUR9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC28.42■■■□□ 2.14
CCDC144AA2RUR9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
CCDC144AA2RUR9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC144AA2RUR9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC144AA2RUR9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
CCDC144AA2RUR9 AC011506.1-201ENST00000474329 610 ntBASIC28.42■■■□□ 2.14
CCDC144AA2RUR9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC28.42■■■□□ 2.14
CCDC144AA2RUR9 AC010947.1-201ENST00000623454 693 ntBASIC28.42■■■□□ 2.14
CCDC144AA2RUR9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC28.42■■■□□ 2.14
CCDC144AA2RUR9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CCDC144AA2RUR9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC28.41■■■□□ 2.14
CCDC144AA2RUR9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CCDC144AA2RUR9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC28.41■■■□□ 2.14
CCDC144AA2RUR9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CCDC144AA2RUR9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC28.41■■■□□ 2.14
CCDC144AA2RUR9 AP005242.2-201ENST00000580065 1175 ntBASIC28.41■■■□□ 2.14
CCDC144AA2RUR9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC28.41■■■□□ 2.14
CCDC144AA2RUR9 AL162377.1-201ENST00000618844 1793 ntBASIC28.41■■■□□ 2.14
CCDC144AA2RUR9 GOLGA2P11-201ENST00000562660 1621 ntBASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 FEM1AP1-201ENST00000431297 1995 ntBASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC28.4■■■□□ 2.14
CCDC144AA2RUR9 RCC2P6-201ENST00000526625 1557 ntBASIC28.39■■■□□ 2.14
CCDC144AA2RUR9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC28.39■■■□□ 2.14
CCDC144AA2RUR9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
CCDC144AA2RUR9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC28.39■■■□□ 2.14
CCDC144AA2RUR9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC28.39■■■□□ 2.14
CCDC144AA2RUR9 NAPSB-206ENST00000562112 1266 ntBASIC28.39■■■□□ 2.14
CCDC144AA2RUR9 RN7SL850P-201ENST00000579959 291 ntBASIC28.39■■■□□ 2.14
CCDC144AA2RUR9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC28.39■■■□□ 2.14
CCDC144AA2RUR9 AC131212.4-201ENST00000623606 975 ntBASIC28.39■■■□□ 2.14
CCDC144AA2RUR9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC28.39■■■□□ 2.14
CCDC144AA2RUR9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
CCDC144AA2RUR9 KRT8P8-201ENST00000434750 1448 ntBASIC28.39■■■□□ 2.13
CCDC144AA2RUR9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
CCDC144AA2RUR9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 GABARAPL3-202ENST00000624044 1851 ntBASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
CCDC144AA2RUR9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC28.37■■■□□ 2.13
CCDC144AA2RUR9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC144AA2RUR9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms