Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC66A2RUB6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC66A2RUB6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CCDC66A2RUB6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CCDC66A2RUB6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC66A2RUB6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC66A2RUB6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC66A2RUB6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC66A2RUB6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC66A2RUB6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC66A2RUB6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC66A2RUB6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 KRT19P1-201ENST00000405746 1186 ntBASIC21.22■□□□□ 0.99
CCDC66A2RUB6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 CDV3P1-201ENST00000471403 739 ntBASIC21.22■□□□□ 0.99
CCDC66A2RUB6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 AP000997.3-201ENST00000623333 2250 ntBASIC21.22■□□□□ 0.99
CCDC66A2RUB6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC66A2RUB6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms