Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
HFM1A2PYH4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
HFM1A2PYH4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
HFM1A2PYH4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
HFM1A2PYH4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
HFM1A2PYH4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
HFM1A2PYH4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
HFM1A2PYH4 HLA-A-209ENST00000638375 975 ntBASIC29.28■■■□□ 2.28
HFM1A2PYH4 KRT16P1-201ENST00000399124 1418 ntBASIC29.28■■■□□ 2.28
HFM1A2PYH4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
HFM1A2PYH4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
HFM1A2PYH4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
HFM1A2PYH4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
HFM1A2PYH4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
HFM1A2PYH4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
HFM1A2PYH4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC29.28■■■□□ 2.28
HFM1A2PYH4 ABBA01031674.1-201ENST00000635145 728 ntBASIC29.28■■■□□ 2.28
HFM1A2PYH4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
HFM1A2PYH4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
HFM1A2PYH4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
HFM1A2PYH4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
HFM1A2PYH4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
HFM1A2PYH4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
HFM1A2PYH4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
HFM1A2PYH4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC29.27■■■□□ 2.28
HFM1A2PYH4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
HFM1A2PYH4 KRT8P8-201ENST00000434750 1448 ntBASIC29.27■■■□□ 2.28
HFM1A2PYH4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC29.27■■■□□ 2.28
HFM1A2PYH4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC29.27■■■□□ 2.28
HFM1A2PYH4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC29.26■■■□□ 2.28
HFM1A2PYH4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC29.26■■■□□ 2.28
HFM1A2PYH4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
HFM1A2PYH4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC29.26■■■□□ 2.28
HFM1A2PYH4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
HFM1A2PYH4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC29.26■■■□□ 2.27
HFM1A2PYH4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
HFM1A2PYH4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC29.26■■■□□ 2.27
HFM1A2PYH4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
HFM1A2PYH4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
HFM1A2PYH4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
HFM1A2PYH4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC29.26■■■□□ 2.27
HFM1A2PYH4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
HFM1A2PYH4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
HFM1A2PYH4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
HFM1A2PYH4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC29.26■■■□□ 2.27
HFM1A2PYH4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
HFM1A2PYH4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
HFM1A2PYH4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
HFM1A2PYH4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
HFM1A2PYH4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
HFM1A2PYH4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
HFM1A2PYH4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
HFM1A2PYH4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
HFM1A2PYH4 MESTP1-201ENST00000404287 994 ntBASIC29.25■■■□□ 2.27
HFM1A2PYH4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC29.25■■■□□ 2.27
HFM1A2PYH4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC29.25■■■□□ 2.27
HFM1A2PYH4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC29.25■■■□□ 2.27
HFM1A2PYH4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC29.25■■■□□ 2.27
HFM1A2PYH4 AC073912.3-201ENST00000624414 853 ntBASIC29.25■■■□□ 2.27
HFM1A2PYH4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC29.25■■■□□ 2.27
HFM1A2PYH4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
HFM1A2PYH4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
HFM1A2PYH4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
HFM1A2PYH4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC29.24■■■□□ 2.27
HFM1A2PYH4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
HFM1A2PYH4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
HFM1A2PYH4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
HFM1A2PYH4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
HFM1A2PYH4 AC004980.1-204ENST00000429707 299 ntBASIC29.24■■■□□ 2.27
HFM1A2PYH4 PPP1R14BP5-201ENST00000440334 435 ntBASIC29.24■■■□□ 2.27
HFM1A2PYH4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
HFM1A2PYH4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC29.24■■■□□ 2.27
HFM1A2PYH4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC29.24■■■□□ 2.27
HFM1A2PYH4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
HFM1A2PYH4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
HFM1A2PYH4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC29.23■■■□□ 2.27
HFM1A2PYH4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
HFM1A2PYH4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
HFM1A2PYH4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC29.23■■■□□ 2.27
HFM1A2PYH4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
HFM1A2PYH4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
HFM1A2PYH4 TSPY15P-201ENST00000457163 923 ntBASIC29.23■■■□□ 2.27
HFM1A2PYH4 NME1-207ENST00000480143 964 ntTSL 2 BASIC29.23■■■□□ 2.27
HFM1A2PYH4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC29.23■■■□□ 2.27
HFM1A2PYH4 AP003071.4-201ENST00000562276 1284 ntBASIC29.23■■■□□ 2.27
HFM1A2PYH4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC29.23■■■□□ 2.27
HFM1A2PYH4 REXO1L10P-201ENST00000615707 1290 ntBASIC29.23■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms