Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 FAM197Y1-201ENST00000421178 764 ntBASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 AP003071.4-201ENST00000562276 1284 ntBASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 AC116351.2-201ENST00000606540 1585 ntBASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 AC092667.1-201ENST00000434301 2586 ntBASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 KSR1P1-201ENST00000446298 240 ntBASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV10A0A0B4J240 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 AC211429.1-201ENST00000415277 523 ntBASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 ECEL1P3-201ENST00000427961 737 ntBASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 YBX1P10-201ENST00000444752 975 ntBASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 AL355075.4-201ENST00000554988 638 ntBASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV10A0A0B4J240 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV10A0A0B4J240 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms